Gene : Phvul.004G159000 P. vulgaris v2.1
Defline:  (1 of 3) K03456 - serine/threonine-protein phosphatase 2A regulatory subunit A (PPP2R1) Genomic Order:  1632
Name:  ? Phvul.004G159000 Secondary Identifier:  ? PAC:37162677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G159000 0.5kb upstream 0.5kb upstream 10155 true Chr04: 46301543-46311697 Phaseolus vulgaris
Phvul.004G159000 0.5kb upstream 0.5kb upstream 500 false Chr04: 46301543-46302042 Phaseolus vulgaris
Phvul.004G159000 0.5kb downstream 0.5kb downstream 10155 true Chr04: 46302043-46312197 Phaseolus vulgaris
Phvul.004G159000 0.5kb downstream 0.5kb downstream 500 false Chr04: 46311698-46312197 Phaseolus vulgaris
Phvul.004G159000 1.0kb upstream 1.0kb upstream 10655 true Chr04: 46301043-46311697 Phaseolus vulgaris
Phvul.004G159000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46301043-46302042 Phaseolus vulgaris
Phvul.004G159000 1.0kb downstream 1.0kb downstream 10655 true Chr04: 46302043-46312697 Phaseolus vulgaris
Phvul.004G159000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46311698-46312697 Phaseolus vulgaris
Phvul.004G159000 2.0kb upstream 2.0kb upstream 11655 true Chr04: 46300043-46311697 Phaseolus vulgaris
Phvul.004G159000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46300043-46302042 Phaseolus vulgaris
Phvul.004G159000 2.0kb downstream 2.0kb downstream 11655 true Chr04: 46302043-46313697 Phaseolus vulgaris
Phvul.004G159000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46311698-46313697 Phaseolus vulgaris
Phvul.004G159000 5.0kb upstream 5.0kb upstream 14655 true Chr04: 46297043-46311697 Phaseolus vulgaris
Phvul.004G159000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46297043-46302042 Phaseolus vulgaris
Phvul.004G159000 5.0kb downstream 5.0kb downstream 14655 true Chr04: 46302043-46316697 Phaseolus vulgaris
Phvul.004G159000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46311698-46316697 Phaseolus vulgaris
Phvul.004G159000 10.0kb upstream 10.0kb upstream 19655 true Chr04: 46292043-46311697 Phaseolus vulgaris
Phvul.004G159000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46292043-46302042 Phaseolus vulgaris
Phvul.004G159000 10.0kb downstream 10.0kb downstream 19655 true Chr04: 46302043-46321697 Phaseolus vulgaris
Phvul.004G159000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46311698-46321697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310161 5265 Fabidae View MSA
124063893 5270 Rosid View MSA
123738381 5271 Pentapetalae View MSA
122789680 5272 Eudicot View MSA
122049512 5273 Angiosperm View MSA
121346959 5274 Embryophyte View MSA
123427747 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.8622 0.0 69.6571   Low
cufflinks 41.9934 0.0 111.21 High  
cufflinks 46.9786 0.0 125.206 High  
cufflinks 56.822 0.0 154.02 High  
cufflinks 57.907 0.0 157.29 High  
cufflinks 48.3223 0.0 129.194 High  
cufflinks 40.3947 0.0 106.619 High  
cufflinks 35.6183 0.0 93.239 High  
cufflinks 54.0072 0.0 145.738 High  
cufflinks 42.5711 0.0 112.942 High  
cufflinks 62.046 0.0 169.732 High High

0 Strain