Gene : Phvul.007G108400 P. vulgaris v2.1
Defline:  (1 of 36) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1094
Name:  ? Phvul.007G108400 Secondary Identifier:  ? PAC:37164704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G108400 0.5kb upstream 0.5kb upstream 1484 true Chr07: 13683862-13685345 Phaseolus vulgaris
Phvul.007G108400 0.5kb upstream 0.5kb upstream 500 false Chr07: 13683862-13684361 Phaseolus vulgaris
Phvul.007G108400 0.5kb downstream 0.5kb downstream 1484 true Chr07: 13684362-13685845 Phaseolus vulgaris
Phvul.007G108400 0.5kb downstream 0.5kb downstream 500 false Chr07: 13685346-13685845 Phaseolus vulgaris
Phvul.007G108400 1.0kb upstream 1.0kb upstream 1984 true Chr07: 13683362-13685345 Phaseolus vulgaris
Phvul.007G108400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13683362-13684361 Phaseolus vulgaris
Phvul.007G108400 1.0kb downstream 1.0kb downstream 1984 true Chr07: 13684362-13686345 Phaseolus vulgaris
Phvul.007G108400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13685346-13686345 Phaseolus vulgaris
Phvul.007G108400 2.0kb upstream 2.0kb upstream 2984 true Chr07: 13682362-13685345 Phaseolus vulgaris
Phvul.007G108400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13682362-13684361 Phaseolus vulgaris
Phvul.007G108400 2.0kb downstream 2.0kb downstream 2984 true Chr07: 13684362-13687345 Phaseolus vulgaris
Phvul.007G108400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13685346-13687345 Phaseolus vulgaris
Phvul.007G108400 5.0kb upstream 5.0kb upstream 5984 true Chr07: 13679362-13685345 Phaseolus vulgaris
Phvul.007G108400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13679362-13684361 Phaseolus vulgaris
Phvul.007G108400 5.0kb downstream 5.0kb downstream 5984 true Chr07: 13684362-13690345 Phaseolus vulgaris
Phvul.007G108400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13685346-13690345 Phaseolus vulgaris
Phvul.007G108400 10.0kb upstream 10.0kb upstream 10984 true Chr07: 13674362-13685345 Phaseolus vulgaris
Phvul.007G108400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13674362-13684361 Phaseolus vulgaris
Phvul.007G108400 10.0kb downstream 10.0kb downstream 10984 true Chr07: 13684362-13695345 Phaseolus vulgaris
Phvul.007G108400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13685346-13695345 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303616 5265 Fabidae View MSA
124069006 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3801 0.0 29.5645   High
cufflinks 0.831445 0.0 3.09519    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.60506 0.0 5.63662    
cufflinks 1.58774 0.0 5.61198    
cufflinks 0.0454777 0.0 0.219272 Low Low
cufflinks 0.342665 0.0 1.36408 Low  
cufflinks 0.172752 0.0 0.728393 Low  
cufflinks 0.164085 0.0 0.693838 Low  
cufflinks 4.52095 0.0 14.1689   High
cufflinks 0.366893 0.0 1.46179 Low  

0 Strain