Gene : Phvul.007G243400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23201:SF20 - GIBBERELLIN-REGULATED PROTEIN 14-RELATED Genomic Order:  2289
Name:  ? Phvul.007G243400 Secondary Identifier:  ? PAC:37165506
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G243400 0.5kb upstream 0.5kb upstream 1504 true Chr07: 36655282-36656785 Phaseolus vulgaris
Phvul.007G243400 0.5kb upstream 0.5kb upstream 500 false Chr07: 36656286-36656785 Phaseolus vulgaris
Phvul.007G243400 0.5kb downstream 0.5kb downstream 1504 true Chr07: 36654782-36656285 Phaseolus vulgaris
Phvul.007G243400 0.5kb downstream 0.5kb downstream 500 false Chr07: 36654782-36655281 Phaseolus vulgaris
Phvul.007G243400 1.0kb upstream 1.0kb upstream 2004 true Chr07: 36655282-36657285 Phaseolus vulgaris
Phvul.007G243400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36656286-36657285 Phaseolus vulgaris
Phvul.007G243400 1.0kb downstream 1.0kb downstream 2004 true Chr07: 36654282-36656285 Phaseolus vulgaris
Phvul.007G243400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36654282-36655281 Phaseolus vulgaris
Phvul.007G243400 2.0kb upstream 2.0kb upstream 3004 true Chr07: 36655282-36658285 Phaseolus vulgaris
Phvul.007G243400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36656286-36658285 Phaseolus vulgaris
Phvul.007G243400 2.0kb downstream 2.0kb downstream 3004 true Chr07: 36653282-36656285 Phaseolus vulgaris
Phvul.007G243400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36653282-36655281 Phaseolus vulgaris
Phvul.007G243400 5.0kb upstream 5.0kb upstream 6004 true Chr07: 36655282-36661285 Phaseolus vulgaris
Phvul.007G243400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36656286-36661285 Phaseolus vulgaris
Phvul.007G243400 5.0kb downstream 5.0kb downstream 6004 true Chr07: 36650282-36656285 Phaseolus vulgaris
Phvul.007G243400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36650282-36655281 Phaseolus vulgaris
Phvul.007G243400 10.0kb upstream 10.0kb upstream 11004 true Chr07: 36655282-36666285 Phaseolus vulgaris
Phvul.007G243400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36656286-36666285 Phaseolus vulgaris
Phvul.007G243400 10.0kb downstream 10.0kb downstream 11004 true Chr07: 36645282-36656285 Phaseolus vulgaris
Phvul.007G243400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36645282-36655281 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300298 5265 Fabidae View MSA
124062326 5270 Rosid View MSA
123742542 5271 Pentapetalae View MSA
122770309 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.95597 0.0 14.2255    
cufflinks 11.3288 0.0 36.2494   High
cufflinks 0.989929 0.0 3.96881    
cufflinks 1.88268 0.0 7.26902    
cufflinks 35.3492 0.0 99.8744 High High
cufflinks 0.251964 0.0 1.14719 Low  
cufflinks 5.51386 0.0 19.1486    
cufflinks 0.133407 0.0 0.647976 Low Low
cufflinks 0.128192 0.0 0.63276 Low Low
cufflinks 1.66858 0.0 6.47651    

0 Strain