Gene : Phvul.007G242433 P. vulgaris v2.1
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  2278
Name:  ? Phvul.007G242433 Secondary Identifier:  ? PAC:37165017
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6012-1 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G242433 0.5kb upstream 0.5kb upstream 5778 true Chr07: 36573464-36579241 Phaseolus vulgaris
Phvul.007G242433 0.5kb upstream 0.5kb upstream 500 false Chr07: 36573464-36573963 Phaseolus vulgaris
Phvul.007G242433 0.5kb downstream 0.5kb downstream 5778 true Chr07: 36573964-36579741 Phaseolus vulgaris
Phvul.007G242433 0.5kb downstream 0.5kb downstream 500 false Chr07: 36579242-36579741 Phaseolus vulgaris
Phvul.007G242433 1.0kb upstream 1.0kb upstream 6278 true Chr07: 36572964-36579241 Phaseolus vulgaris
Phvul.007G242433 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36572964-36573963 Phaseolus vulgaris
Phvul.007G242433 1.0kb downstream 1.0kb downstream 6278 true Chr07: 36573964-36580241 Phaseolus vulgaris
Phvul.007G242433 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36579242-36580241 Phaseolus vulgaris
Phvul.007G242433 2.0kb upstream 2.0kb upstream 7278 true Chr07: 36571964-36579241 Phaseolus vulgaris
Phvul.007G242433 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36571964-36573963 Phaseolus vulgaris
Phvul.007G242433 2.0kb downstream 2.0kb downstream 7278 true Chr07: 36573964-36581241 Phaseolus vulgaris
Phvul.007G242433 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36579242-36581241 Phaseolus vulgaris
Phvul.007G242433 5.0kb upstream 5.0kb upstream 10278 true Chr07: 36568964-36579241 Phaseolus vulgaris
Phvul.007G242433 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36568964-36573963 Phaseolus vulgaris
Phvul.007G242433 5.0kb downstream 5.0kb downstream 10278 true Chr07: 36573964-36584241 Phaseolus vulgaris
Phvul.007G242433 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36579242-36584241 Phaseolus vulgaris
Phvul.007G242433 10.0kb upstream 10.0kb upstream 15278 true Chr07: 36563964-36579241 Phaseolus vulgaris
Phvul.007G242433 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36563964-36573963 Phaseolus vulgaris
Phvul.007G242433 10.0kb downstream 10.0kb downstream 15278 true Chr07: 36573964-36589241 Phaseolus vulgaris
Phvul.007G242433 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36579242-36589241 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307205 5265 Fabidae View MSA
124070167 5270 Rosid View MSA
123742618 5271 Pentapetalae View MSA
122794385 5272 Eudicot View MSA
122048448 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121348212 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.72494 0.0 10.2413    
cufflinks 1.62267 0.0 18.8297    
cufflinks 1.43862 0.0 10.1154    
cufflinks 1.58474 0.0 10.2856    
cufflinks 0.70484 0.0 10.0643   Low
cufflinks 0.937839 0.0 9.05551    
cufflinks 1.57478 0.0 11.0797    
cufflinks 1.32519 0.0 13.2584    
cufflinks 0.921693 0.0 8.25524    
cufflinks 4.3541 0.0 23.2703   High
cufflinks 1.16323 0.0 10.2855    

0 Strain