Gene : Phvul.005G107000 P. vulgaris v2.1
Defline:  (1 of 2) K02989 - small subunit ribosomal protein S5e (RP-S5e, RPS5) Genomic Order:  1066
Name:  ? Phvul.005G107000 Secondary Identifier:  ? PAC:37152255
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G107000 0.5kb upstream 0.5kb upstream 2890 true Chr05: 32777956-32780845 Phaseolus vulgaris
Phvul.005G107000 0.5kb upstream 0.5kb upstream 500 false Chr05: 32777956-32778455 Phaseolus vulgaris
Phvul.005G107000 0.5kb downstream 0.5kb downstream 2890 true Chr05: 32778456-32781345 Phaseolus vulgaris
Phvul.005G107000 0.5kb downstream 0.5kb downstream 500 false Chr05: 32780846-32781345 Phaseolus vulgaris
Phvul.005G107000 1.0kb upstream 1.0kb upstream 3390 true Chr05: 32777456-32780845 Phaseolus vulgaris
Phvul.005G107000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32777456-32778455 Phaseolus vulgaris
Phvul.005G107000 1.0kb downstream 1.0kb downstream 3390 true Chr05: 32778456-32781845 Phaseolus vulgaris
Phvul.005G107000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32780846-32781845 Phaseolus vulgaris
Phvul.005G107000 2.0kb upstream 2.0kb upstream 4390 true Chr05: 32776456-32780845 Phaseolus vulgaris
Phvul.005G107000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32776456-32778455 Phaseolus vulgaris
Phvul.005G107000 2.0kb downstream 2.0kb downstream 4390 true Chr05: 32778456-32782845 Phaseolus vulgaris
Phvul.005G107000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32780846-32782845 Phaseolus vulgaris
Phvul.005G107000 5.0kb upstream 5.0kb upstream 7390 true Chr05: 32773456-32780845 Phaseolus vulgaris
Phvul.005G107000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32773456-32778455 Phaseolus vulgaris
Phvul.005G107000 5.0kb downstream 5.0kb downstream 7390 true Chr05: 32778456-32785845 Phaseolus vulgaris
Phvul.005G107000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32780846-32785845 Phaseolus vulgaris
Phvul.005G107000 10.0kb upstream 10.0kb upstream 12390 true Chr05: 32768456-32780845 Phaseolus vulgaris
Phvul.005G107000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32768456-32778455 Phaseolus vulgaris
Phvul.005G107000 10.0kb downstream 10.0kb downstream 12390 true Chr05: 32778456-32790845 Phaseolus vulgaris
Phvul.005G107000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32780846-32790845 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 143.315 0.0 389.259 High  
cufflinks 198.971 0.0 557.543 High High
cufflinks 99.0664 0.0 261.315 High  
cufflinks 214.928 0.0 604.853 High High
cufflinks 129.508 0.0 347.58 High  
cufflinks 82.8037 0.0 216.185 High Low
cufflinks 113.819 0.0 302.772 High  
cufflinks 155.241 0.0 424.905 High  
cufflinks 172.63 0.0 476.25 High  
cufflinks 74.7342 0.0 194.223 High Low
cufflinks 126.509 0.0 338.584 High  

0 Strain