Gene : Phvul.005G107400 P. vulgaris v2.1
Defline:  (1 of 10) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1070
Name:  ? Phvul.005G107400 Secondary Identifier:  ? PAC:37152320
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G107400 0.5kb upstream 0.5kb upstream 3297 true Chr05: 32867920-32871216 Phaseolus vulgaris
Phvul.005G107400 0.5kb upstream 0.5kb upstream 500 false Chr05: 32870717-32871216 Phaseolus vulgaris
Phvul.005G107400 0.5kb downstream 0.5kb downstream 3297 true Chr05: 32867420-32870716 Phaseolus vulgaris
Phvul.005G107400 0.5kb downstream 0.5kb downstream 500 false Chr05: 32867420-32867919 Phaseolus vulgaris
Phvul.005G107400 1.0kb upstream 1.0kb upstream 3797 true Chr05: 32867920-32871716 Phaseolus vulgaris
Phvul.005G107400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32870717-32871716 Phaseolus vulgaris
Phvul.005G107400 1.0kb downstream 1.0kb downstream 3797 true Chr05: 32866920-32870716 Phaseolus vulgaris
Phvul.005G107400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32866920-32867919 Phaseolus vulgaris
Phvul.005G107400 2.0kb upstream 2.0kb upstream 4797 true Chr05: 32867920-32872716 Phaseolus vulgaris
Phvul.005G107400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32870717-32872716 Phaseolus vulgaris
Phvul.005G107400 2.0kb downstream 2.0kb downstream 4797 true Chr05: 32865920-32870716 Phaseolus vulgaris
Phvul.005G107400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32865920-32867919 Phaseolus vulgaris
Phvul.005G107400 5.0kb upstream 5.0kb upstream 7797 true Chr05: 32867920-32875716 Phaseolus vulgaris
Phvul.005G107400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32870717-32875716 Phaseolus vulgaris
Phvul.005G107400 5.0kb downstream 5.0kb downstream 7797 true Chr05: 32862920-32870716 Phaseolus vulgaris
Phvul.005G107400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32862920-32867919 Phaseolus vulgaris
Phvul.005G107400 10.0kb upstream 10.0kb upstream 12797 true Chr05: 32867920-32880716 Phaseolus vulgaris
Phvul.005G107400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32870717-32880716 Phaseolus vulgaris
Phvul.005G107400 10.0kb downstream 10.0kb downstream 12797 true Chr05: 32857920-32870716 Phaseolus vulgaris
Phvul.005G107400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32857920-32867919 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122301958 5265 Fabidae View MSA
124067375 5270 Rosid View MSA
123749787 5271 Pentapetalae View MSA
122794883 5272 Eudicot View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13355 0.0 0.541129 Low  
cufflinks 0.0480284 0.0 0.21375 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.78836 0.0 5.67779    
cufflinks 8.10747 0.0 22.0357   High
cufflinks 0.220542 0.0 0.859293 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain