Gene : Phvul.007G249100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11075:SF52 - PEPTIDE CHAIN RELEASE FACTOR 3 Genomic Order:  2346
Name:  ? Phvul.007G249100 Secondary Identifier:  ? PAC:37166546
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G249100 0.5kb upstream 0.5kb upstream 6278 true Chr07: 37176704-37182981 Phaseolus vulgaris
Phvul.007G249100 0.5kb upstream 0.5kb upstream 500 false Chr07: 37176704-37177203 Phaseolus vulgaris
Phvul.007G249100 0.5kb downstream 0.5kb downstream 6278 true Chr07: 37177204-37183481 Phaseolus vulgaris
Phvul.007G249100 0.5kb downstream 0.5kb downstream 500 false Chr07: 37182982-37183481 Phaseolus vulgaris
Phvul.007G249100 1.0kb upstream 1.0kb upstream 6778 true Chr07: 37176204-37182981 Phaseolus vulgaris
Phvul.007G249100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37176204-37177203 Phaseolus vulgaris
Phvul.007G249100 1.0kb downstream 1.0kb downstream 6778 true Chr07: 37177204-37183981 Phaseolus vulgaris
Phvul.007G249100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37182982-37183981 Phaseolus vulgaris
Phvul.007G249100 2.0kb upstream 2.0kb upstream 7778 true Chr07: 37175204-37182981 Phaseolus vulgaris
Phvul.007G249100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37175204-37177203 Phaseolus vulgaris
Phvul.007G249100 2.0kb downstream 2.0kb downstream 7778 true Chr07: 37177204-37184981 Phaseolus vulgaris
Phvul.007G249100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37182982-37184981 Phaseolus vulgaris
Phvul.007G249100 5.0kb upstream 5.0kb upstream 10778 true Chr07: 37172204-37182981 Phaseolus vulgaris
Phvul.007G249100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37172204-37177203 Phaseolus vulgaris
Phvul.007G249100 5.0kb downstream 5.0kb downstream 10778 true Chr07: 37177204-37187981 Phaseolus vulgaris
Phvul.007G249100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37182982-37187981 Phaseolus vulgaris
Phvul.007G249100 10.0kb upstream 10.0kb upstream 15778 true Chr07: 37167204-37182981 Phaseolus vulgaris
Phvul.007G249100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37167204-37177203 Phaseolus vulgaris
Phvul.007G249100 10.0kb downstream 10.0kb downstream 15778 true Chr07: 37177204-37192981 Phaseolus vulgaris
Phvul.007G249100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37182982-37192981 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299550 5265 Fabidae View MSA
124051473 5270 Rosid View MSA
123749031 5271 Pentapetalae View MSA
122791384 5272 Eudicot View MSA
122043845 5273 Angiosperm View MSA
121345012 5274 Embryophyte View MSA
123428713 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.63776 0.0 35.4384    
cufflinks 4.31417 0.0 20.6585    
cufflinks 19.9619 0.0 76.5129   High
cufflinks 5.22662 0.0 18.6634    
cufflinks 2.07337 0.0 11.1031    
cufflinks 8.42337 0.0 38.2609    
cufflinks 1.80058 0.0 9.72211    
cufflinks 13.9731 0.0 55.7659   High
cufflinks 0.86895 0.0 6.36292   Low
cufflinks 3.93128 0.0 17.389    
cufflinks 1.60028 0.0 9.29777   Low

0 Strain