Gene : Phvul.005G108750 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31625:SF2 - COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED Genomic Order:  1084
Name:  ? Phvul.005G108750 Secondary Identifier:  ? PAC:37152276
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G108750 0.5kb upstream 0.5kb upstream 2807 true Chr05: 33030513-33033319 Phaseolus vulgaris
Phvul.005G108750 0.5kb upstream 0.5kb upstream 500 false Chr05: 33032820-33033319 Phaseolus vulgaris
Phvul.005G108750 0.5kb downstream 0.5kb downstream 2807 true Chr05: 33030013-33032819 Phaseolus vulgaris
Phvul.005G108750 0.5kb downstream 0.5kb downstream 500 false Chr05: 33030013-33030512 Phaseolus vulgaris
Phvul.005G108750 1.0kb upstream 1.0kb upstream 3307 true Chr05: 33030513-33033819 Phaseolus vulgaris
Phvul.005G108750 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33032820-33033819 Phaseolus vulgaris
Phvul.005G108750 1.0kb downstream 1.0kb downstream 3307 true Chr05: 33029513-33032819 Phaseolus vulgaris
Phvul.005G108750 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33029513-33030512 Phaseolus vulgaris
Phvul.005G108750 2.0kb upstream 2.0kb upstream 4307 true Chr05: 33030513-33034819 Phaseolus vulgaris
Phvul.005G108750 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33032820-33034819 Phaseolus vulgaris
Phvul.005G108750 2.0kb downstream 2.0kb downstream 4307 true Chr05: 33028513-33032819 Phaseolus vulgaris
Phvul.005G108750 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33028513-33030512 Phaseolus vulgaris
Phvul.005G108750 5.0kb upstream 5.0kb upstream 7307 true Chr05: 33030513-33037819 Phaseolus vulgaris
Phvul.005G108750 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33032820-33037819 Phaseolus vulgaris
Phvul.005G108750 5.0kb downstream 5.0kb downstream 7307 true Chr05: 33025513-33032819 Phaseolus vulgaris
Phvul.005G108750 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33025513-33030512 Phaseolus vulgaris
Phvul.005G108750 10.0kb upstream 10.0kb upstream 12307 true Chr05: 33030513-33042819 Phaseolus vulgaris
Phvul.005G108750 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33032820-33042819 Phaseolus vulgaris
Phvul.005G108750 10.0kb downstream 10.0kb downstream 12307 true Chr05: 33020513-33032819 Phaseolus vulgaris
Phvul.005G108750 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33020513-33030512 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313056 5265 Fabidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76648 0.0 14.794    
cufflinks 2.6659 0.0 14.3703    
cufflinks 3.55612 0.0 21.951    
cufflinks 1.18313 0.0 6.64694    
cufflinks 1.96059 0.0 9.56808    
cufflinks 3.53215 0.0 17.0089    
cufflinks 0.175145 0.0 0.729268 Low Low
cufflinks 0.229807 0.0 1.82356 Low Low
cufflinks 0.117325 0.0 0.513682 Low Low
cufflinks 3.57261 0.0 17.8857    
cufflinks 1.47104 0.0 7.65508    

0 Strain