Gene : Phvul.007G249200 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase Genomic Order:  2347
Name:  ? Phvul.007G249200 Secondary Identifier:  ? PAC:37166843
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2161 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G249200 0.5kb upstream 0.5kb upstream 13572 true Chr07: 37186165-37199736 Phaseolus vulgaris
Phvul.007G249200 0.5kb upstream 0.5kb upstream 500 false Chr07: 37186165-37186664 Phaseolus vulgaris
Phvul.007G249200 0.5kb downstream 0.5kb downstream 13572 true Chr07: 37186665-37200236 Phaseolus vulgaris
Phvul.007G249200 0.5kb downstream 0.5kb downstream 500 false Chr07: 37199737-37200236 Phaseolus vulgaris
Phvul.007G249200 1.0kb upstream 1.0kb upstream 14072 true Chr07: 37185665-37199736 Phaseolus vulgaris
Phvul.007G249200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37185665-37186664 Phaseolus vulgaris
Phvul.007G249200 1.0kb downstream 1.0kb downstream 14072 true Chr07: 37186665-37200736 Phaseolus vulgaris
Phvul.007G249200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37199737-37200736 Phaseolus vulgaris
Phvul.007G249200 2.0kb upstream 2.0kb upstream 15072 true Chr07: 37184665-37199736 Phaseolus vulgaris
Phvul.007G249200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37184665-37186664 Phaseolus vulgaris
Phvul.007G249200 2.0kb downstream 2.0kb downstream 15072 true Chr07: 37186665-37201736 Phaseolus vulgaris
Phvul.007G249200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37199737-37201736 Phaseolus vulgaris
Phvul.007G249200 5.0kb upstream 5.0kb upstream 18072 true Chr07: 37181665-37199736 Phaseolus vulgaris
Phvul.007G249200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37181665-37186664 Phaseolus vulgaris
Phvul.007G249200 5.0kb downstream 5.0kb downstream 18072 true Chr07: 37186665-37204736 Phaseolus vulgaris
Phvul.007G249200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37199737-37204736 Phaseolus vulgaris
Phvul.007G249200 10.0kb upstream 10.0kb upstream 23072 true Chr07: 37176665-37199736 Phaseolus vulgaris
Phvul.007G249200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37176665-37186664 Phaseolus vulgaris
Phvul.007G249200 10.0kb downstream 10.0kb downstream 23072 true Chr07: 37186665-37209736 Phaseolus vulgaris
Phvul.007G249200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37199737-37209736 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307230 5265 Fabidae View MSA
124068713 5270 Rosid View MSA
123740446 5271 Pentapetalae View MSA
122786147 5272 Eudicot View MSA
122044962 5273 Angiosperm View MSA
121349297 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56282 0.0 5.01563   Low
cufflinks 2.48002 0.0 7.57288    
cufflinks 9.79194 0.0 26.0707   High
cufflinks 2.73105 0.0 8.32897    
cufflinks 2.38679 0.0 7.38817    
cufflinks 5.66803 0.0 15.8278   High
cufflinks 2.72934 0.0 8.2371    
cufflinks 3.50188 0.0 10.2061    
cufflinks 3.22148 0.0 9.57288    
cufflinks 2.92836 0.0 8.78595    
cufflinks 1.73988 0.0 5.57075   Low

0 Strain