Gene : Phvul.007G247500 P. vulgaris v2.1
Defline:  (1 of 2) K07213 - copper chaperone (ATOX1, ATX1, copZ) Genomic Order:  2330
Name:  ? Phvul.007G247500 Secondary Identifier:  ? PAC:37166636
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G247500 0.5kb upstream 0.5kb upstream 3670 true Chr07: 37036525-37040194 Phaseolus vulgaris
Phvul.007G247500 0.5kb upstream 0.5kb upstream 500 false Chr07: 37039695-37040194 Phaseolus vulgaris
Phvul.007G247500 0.5kb downstream 0.5kb downstream 3670 true Chr07: 37036025-37039694 Phaseolus vulgaris
Phvul.007G247500 0.5kb downstream 0.5kb downstream 500 false Chr07: 37036025-37036524 Phaseolus vulgaris
Phvul.007G247500 1.0kb upstream 1.0kb upstream 4170 true Chr07: 37036525-37040694 Phaseolus vulgaris
Phvul.007G247500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37039695-37040694 Phaseolus vulgaris
Phvul.007G247500 1.0kb downstream 1.0kb downstream 4170 true Chr07: 37035525-37039694 Phaseolus vulgaris
Phvul.007G247500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37035525-37036524 Phaseolus vulgaris
Phvul.007G247500 2.0kb upstream 2.0kb upstream 5170 true Chr07: 37036525-37041694 Phaseolus vulgaris
Phvul.007G247500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37039695-37041694 Phaseolus vulgaris
Phvul.007G247500 2.0kb downstream 2.0kb downstream 5170 true Chr07: 37034525-37039694 Phaseolus vulgaris
Phvul.007G247500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37034525-37036524 Phaseolus vulgaris
Phvul.007G247500 5.0kb upstream 5.0kb upstream 8170 true Chr07: 37036525-37044694 Phaseolus vulgaris
Phvul.007G247500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37039695-37044694 Phaseolus vulgaris
Phvul.007G247500 5.0kb downstream 5.0kb downstream 8170 true Chr07: 37031525-37039694 Phaseolus vulgaris
Phvul.007G247500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37031525-37036524 Phaseolus vulgaris
Phvul.007G247500 10.0kb upstream 10.0kb upstream 13170 true Chr07: 37036525-37049694 Phaseolus vulgaris
Phvul.007G247500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37039695-37049694 Phaseolus vulgaris
Phvul.007G247500 10.0kb downstream 10.0kb downstream 13170 true Chr07: 37026525-37039694 Phaseolus vulgaris
Phvul.007G247500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37026525-37036524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122312421 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1113.57 0.0 3862.82 High High
cufflinks 256.733 0.0 708.845 High  
cufflinks 147.845 0.0 390.58 High  
cufflinks 420.211 0.0 1230.37 High  
cufflinks 325.096 0.0 915.511 High  
cufflinks 56.2946 0.0 146.169 High Low
cufflinks 147.372 0.0 388.989 High  
cufflinks 54.8928 0.0 142.499 High Low
cufflinks 204.853 0.0 554.846 High  
cufflinks 418.571 0.0 1220.86 High  
cufflinks 435.287 0.0 1275.82 High  

0 Strain