Gene : Phvul.005G108000 P. vulgaris v2.1
Defline:  (1 of 13) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  1076
Name:  ? Phvul.005G108000 Secondary Identifier:  ? PAC:37153405
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G108000 0.5kb upstream 0.5kb upstream 1178 true Chr05: 32917585-32918762 Phaseolus vulgaris
Phvul.005G108000 0.5kb upstream 0.5kb upstream 500 false Chr05: 32918263-32918762 Phaseolus vulgaris
Phvul.005G108000 0.5kb downstream 0.5kb downstream 1178 true Chr05: 32917085-32918262 Phaseolus vulgaris
Phvul.005G108000 0.5kb downstream 0.5kb downstream 500 false Chr05: 32917085-32917584 Phaseolus vulgaris
Phvul.005G108000 1.0kb upstream 1.0kb upstream 1678 true Chr05: 32917585-32919262 Phaseolus vulgaris
Phvul.005G108000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32918263-32919262 Phaseolus vulgaris
Phvul.005G108000 1.0kb downstream 1.0kb downstream 1678 true Chr05: 32916585-32918262 Phaseolus vulgaris
Phvul.005G108000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32916585-32917584 Phaseolus vulgaris
Phvul.005G108000 2.0kb upstream 2.0kb upstream 2678 true Chr05: 32917585-32920262 Phaseolus vulgaris
Phvul.005G108000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32918263-32920262 Phaseolus vulgaris
Phvul.005G108000 2.0kb downstream 2.0kb downstream 2678 true Chr05: 32915585-32918262 Phaseolus vulgaris
Phvul.005G108000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32915585-32917584 Phaseolus vulgaris
Phvul.005G108000 5.0kb upstream 5.0kb upstream 5678 true Chr05: 32917585-32923262 Phaseolus vulgaris
Phvul.005G108000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32918263-32923262 Phaseolus vulgaris
Phvul.005G108000 5.0kb downstream 5.0kb downstream 5678 true Chr05: 32912585-32918262 Phaseolus vulgaris
Phvul.005G108000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32912585-32917584 Phaseolus vulgaris
Phvul.005G108000 10.0kb upstream 10.0kb upstream 10678 true Chr05: 32917585-32928262 Phaseolus vulgaris
Phvul.005G108000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32918263-32928262 Phaseolus vulgaris
Phvul.005G108000 10.0kb downstream 10.0kb downstream 10678 true Chr05: 32907585-32918262 Phaseolus vulgaris
Phvul.005G108000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32907585-32917584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314984 5265 Fabidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6926 0.0 71.5115   High
cufflinks 2.9222 0.0 10.3099    
cufflinks 0.239286 0.0 1.04292 Low Low
cufflinks 15.192 0.0 44.5502    
cufflinks 2.79553 0.0 10.0056    
cufflinks 0.0886442 0.0 0.427399 Low Low
cufflinks 4.75073 0.0 15.8404    
cufflinks 5.9936 0.0 19.3782    
cufflinks 2.56752 0.0 9.16701    
cufflinks 29.3502 0.0 80.8455   High
cufflinks 6.382 0.0 20.7548    

0 Strain