Gene : Phvul.005G089900 P. vulgaris v2.1
Defline:  (1 of 55) PF03514 - GRAS domain family (GRAS) Genomic Order:  871
Name:  ? Phvul.005G089900 Secondary Identifier:  ? PAC:37154361
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G089900 0.5kb upstream 0.5kb upstream 2249 true Chr05: 25382109-25384357 Phaseolus vulgaris
Phvul.005G089900 0.5kb upstream 0.5kb upstream 500 false Chr05: 25383858-25384357 Phaseolus vulgaris
Phvul.005G089900 0.5kb downstream 0.5kb downstream 2249 true Chr05: 25381609-25383857 Phaseolus vulgaris
Phvul.005G089900 0.5kb downstream 0.5kb downstream 500 false Chr05: 25381609-25382108 Phaseolus vulgaris
Phvul.005G089900 1.0kb upstream 1.0kb upstream 2749 true Chr05: 25382109-25384857 Phaseolus vulgaris
Phvul.005G089900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25383858-25384857 Phaseolus vulgaris
Phvul.005G089900 1.0kb downstream 1.0kb downstream 2749 true Chr05: 25381109-25383857 Phaseolus vulgaris
Phvul.005G089900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25381109-25382108 Phaseolus vulgaris
Phvul.005G089900 2.0kb upstream 2.0kb upstream 3749 true Chr05: 25382109-25385857 Phaseolus vulgaris
Phvul.005G089900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25383858-25385857 Phaseolus vulgaris
Phvul.005G089900 2.0kb downstream 2.0kb downstream 3749 true Chr05: 25380109-25383857 Phaseolus vulgaris
Phvul.005G089900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25380109-25382108 Phaseolus vulgaris
Phvul.005G089900 5.0kb upstream 5.0kb upstream 6749 true Chr05: 25382109-25388857 Phaseolus vulgaris
Phvul.005G089900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25383858-25388857 Phaseolus vulgaris
Phvul.005G089900 5.0kb downstream 5.0kb downstream 6749 true Chr05: 25377109-25383857 Phaseolus vulgaris
Phvul.005G089900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25377109-25382108 Phaseolus vulgaris
Phvul.005G089900 10.0kb upstream 10.0kb upstream 11749 true Chr05: 25382109-25393857 Phaseolus vulgaris
Phvul.005G089900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25383858-25393857 Phaseolus vulgaris
Phvul.005G089900 10.0kb downstream 10.0kb downstream 11749 true Chr05: 25372109-25383857 Phaseolus vulgaris
Phvul.005G089900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25372109-25382108 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305990 5265 Fabidae View MSA
124070191 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.09443 0.0 22.0527    
cufflinks 4.54499 0.0 13.0558    
cufflinks 2.20268 0.0 6.85894    
cufflinks 2.22126 0.0 6.95343    
cufflinks 2.52672 0.0 7.79955    
cufflinks 2.09954 0.0 6.57531    
cufflinks 21.3345 0.0 55.1629   High
cufflinks 8.28188 0.0 22.4674    
cufflinks 2.55847 0.0 7.8097    
cufflinks 66.5515 0.0 180.334 High High
cufflinks 1.97877 0.0 6.26966    

0 Strain