Gene : Phvul.005G090200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF350 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  874
Name:  ? Phvul.005G090200 Secondary Identifier:  ? PAC:37153863
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY1F-823 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5152 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G090200 0.5kb upstream 0.5kb upstream 4032 true Chr05: 25506536-25510567 Phaseolus vulgaris
Phvul.005G090200 0.5kb upstream 0.5kb upstream 500 false Chr05: 25506536-25507035 Phaseolus vulgaris
Phvul.005G090200 0.5kb downstream 0.5kb downstream 4032 true Chr05: 25507036-25511067 Phaseolus vulgaris
Phvul.005G090200 0.5kb downstream 0.5kb downstream 500 false Chr05: 25510568-25511067 Phaseolus vulgaris
Phvul.005G090200 1.0kb upstream 1.0kb upstream 4532 true Chr05: 25506036-25510567 Phaseolus vulgaris
Phvul.005G090200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25506036-25507035 Phaseolus vulgaris
Phvul.005G090200 1.0kb downstream 1.0kb downstream 4532 true Chr05: 25507036-25511567 Phaseolus vulgaris
Phvul.005G090200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25510568-25511567 Phaseolus vulgaris
Phvul.005G090200 2.0kb upstream 2.0kb upstream 5532 true Chr05: 25505036-25510567 Phaseolus vulgaris
Phvul.005G090200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25505036-25507035 Phaseolus vulgaris
Phvul.005G090200 2.0kb downstream 2.0kb downstream 5532 true Chr05: 25507036-25512567 Phaseolus vulgaris
Phvul.005G090200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25510568-25512567 Phaseolus vulgaris
Phvul.005G090200 5.0kb upstream 5.0kb upstream 8532 true Chr05: 25502036-25510567 Phaseolus vulgaris
Phvul.005G090200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25502036-25507035 Phaseolus vulgaris
Phvul.005G090200 5.0kb downstream 5.0kb downstream 8532 true Chr05: 25507036-25515567 Phaseolus vulgaris
Phvul.005G090200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25510568-25515567 Phaseolus vulgaris
Phvul.005G090200 10.0kb upstream 10.0kb upstream 13532 true Chr05: 25497036-25510567 Phaseolus vulgaris
Phvul.005G090200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25497036-25507035 Phaseolus vulgaris
Phvul.005G090200 10.0kb downstream 10.0kb downstream 13532 true Chr05: 25507036-25520567 Phaseolus vulgaris
Phvul.005G090200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25510568-25520567 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311355 5265 Fabidae View MSA
124062965 5270 Rosid View MSA
123740862 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.505057 0.0 1.9703    
cufflinks 0.388927 0.0 1.54537 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.42777 0.0 8.20461    
cufflinks 4.44237 0.0 13.9304    
cufflinks 4.53871 0.0 14.2898    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain