Gene : Phvul.007G240600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  2261
Name:  ? Phvul.007G240600 Secondary Identifier:  ? PAC:37164446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris DETOX1-PWY Phaseolus vulgaris pathologic  
Pvulgaris DETOX1-PWY-1 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G240600 0.5kb upstream 0.5kb upstream 4644 true Chr07: 36413116-36417759 Phaseolus vulgaris
Phvul.007G240600 0.5kb upstream 0.5kb upstream 500 false Chr07: 36413116-36413615 Phaseolus vulgaris
Phvul.007G240600 0.5kb downstream 0.5kb downstream 4644 true Chr07: 36413616-36418259 Phaseolus vulgaris
Phvul.007G240600 0.5kb downstream 0.5kb downstream 500 false Chr07: 36417760-36418259 Phaseolus vulgaris
Phvul.007G240600 1.0kb upstream 1.0kb upstream 5144 true Chr07: 36412616-36417759 Phaseolus vulgaris
Phvul.007G240600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36412616-36413615 Phaseolus vulgaris
Phvul.007G240600 1.0kb downstream 1.0kb downstream 5144 true Chr07: 36413616-36418759 Phaseolus vulgaris
Phvul.007G240600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36417760-36418759 Phaseolus vulgaris
Phvul.007G240600 2.0kb upstream 2.0kb upstream 6144 true Chr07: 36411616-36417759 Phaseolus vulgaris
Phvul.007G240600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36411616-36413615 Phaseolus vulgaris
Phvul.007G240600 2.0kb downstream 2.0kb downstream 6144 true Chr07: 36413616-36419759 Phaseolus vulgaris
Phvul.007G240600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36417760-36419759 Phaseolus vulgaris
Phvul.007G240600 5.0kb upstream 5.0kb upstream 9144 true Chr07: 36408616-36417759 Phaseolus vulgaris
Phvul.007G240600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36408616-36413615 Phaseolus vulgaris
Phvul.007G240600 5.0kb downstream 5.0kb downstream 9144 true Chr07: 36413616-36422759 Phaseolus vulgaris
Phvul.007G240600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36417760-36422759 Phaseolus vulgaris
Phvul.007G240600 10.0kb upstream 10.0kb upstream 14144 true Chr07: 36403616-36417759 Phaseolus vulgaris
Phvul.007G240600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36403616-36413615 Phaseolus vulgaris
Phvul.007G240600 10.0kb downstream 10.0kb downstream 14144 true Chr07: 36413616-36427759 Phaseolus vulgaris
Phvul.007G240600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36417760-36427759 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308023 5265 Fabidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.687 0.0 59.0648    
cufflinks 20.7164 0.0 104.862   High
cufflinks 14.0796 0.0 66.1218    
cufflinks 9.41158 0.0 38.015    
cufflinks 6.81966 0.0 40.3273    
cufflinks 19.7199 0.0 88.6277   High
cufflinks 3.77064 0.0 24.7651   Low
cufflinks 3.13208 0.0 18.2387   Low
cufflinks 2.72877 0.0 16.8023   Low
cufflinks 9.83089 0.0 55.1639    
cufflinks 5.7365 0.0 27.6772    

0 Strain