Gene : Phvul.005G095400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22814:SF112 - HEAVY METAL TRANSPORT/DETOXIFICATION-LIKE PROTEIN Genomic Order:  952
Name:  ? Phvul.005G095400 Secondary Identifier:  ? PAC:37152517
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G095400 0.5kb upstream 0.5kb upstream 1825 true Chr05: 29797311-29799135 Phaseolus vulgaris
Phvul.005G095400 0.5kb upstream 0.5kb upstream 500 false Chr05: 29797311-29797810 Phaseolus vulgaris
Phvul.005G095400 0.5kb downstream 0.5kb downstream 1825 true Chr05: 29797811-29799635 Phaseolus vulgaris
Phvul.005G095400 0.5kb downstream 0.5kb downstream 500 false Chr05: 29799136-29799635 Phaseolus vulgaris
Phvul.005G095400 1.0kb upstream 1.0kb upstream 2325 true Chr05: 29796811-29799135 Phaseolus vulgaris
Phvul.005G095400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29796811-29797810 Phaseolus vulgaris
Phvul.005G095400 1.0kb downstream 1.0kb downstream 2325 true Chr05: 29797811-29800135 Phaseolus vulgaris
Phvul.005G095400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29799136-29800135 Phaseolus vulgaris
Phvul.005G095400 2.0kb upstream 2.0kb upstream 3325 true Chr05: 29795811-29799135 Phaseolus vulgaris
Phvul.005G095400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29795811-29797810 Phaseolus vulgaris
Phvul.005G095400 2.0kb downstream 2.0kb downstream 3325 true Chr05: 29797811-29801135 Phaseolus vulgaris
Phvul.005G095400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29799136-29801135 Phaseolus vulgaris
Phvul.005G095400 5.0kb upstream 5.0kb upstream 6325 true Chr05: 29792811-29799135 Phaseolus vulgaris
Phvul.005G095400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29792811-29797810 Phaseolus vulgaris
Phvul.005G095400 5.0kb downstream 5.0kb downstream 6325 true Chr05: 29797811-29804135 Phaseolus vulgaris
Phvul.005G095400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29799136-29804135 Phaseolus vulgaris
Phvul.005G095400 10.0kb upstream 10.0kb upstream 11325 true Chr05: 29787811-29799135 Phaseolus vulgaris
Phvul.005G095400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29787811-29797810 Phaseolus vulgaris
Phvul.005G095400 10.0kb downstream 10.0kb downstream 11325 true Chr05: 29797811-29809135 Phaseolus vulgaris
Phvul.005G095400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29799136-29809135 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301828 5265 Fabidae View MSA
124064380 5270 Rosid View MSA
123745345 5271 Pentapetalae View MSA
122793505 5272 Eudicot View MSA
122047069 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366909 0.0 1.52197 Low  
cufflinks 0.111517 0.0 0.516971 Low  
cufflinks 0.101491 0.0 0.474033 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.870783 0.0 3.39313    
cufflinks 0.076301 0.0 0.367886 Low  
cufflinks 1.38739 0.0 5.16373    
cufflinks 0.513321 0.0 2.05893    
cufflinks 6.21056 0.0 19.7899   High
cufflinks 0.0327128 0.0 0.174977 Low Low
cufflinks 1.13864 0.0 4.33289    

0 Strain