Gene : Phvul.007G240500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  2260
Name:  ? Phvul.007G240500 Secondary Identifier:  ? PAC:37167363
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G240500 0.5kb upstream 0.5kb upstream 4027 true Chr07: 36408684-36412710 Phaseolus vulgaris
Phvul.007G240500 0.5kb upstream 0.5kb upstream 500 false Chr07: 36408684-36409183 Phaseolus vulgaris
Phvul.007G240500 0.5kb downstream 0.5kb downstream 4027 true Chr07: 36409184-36413210 Phaseolus vulgaris
Phvul.007G240500 0.5kb downstream 0.5kb downstream 500 false Chr07: 36412711-36413210 Phaseolus vulgaris
Phvul.007G240500 1.0kb upstream 1.0kb upstream 4527 true Chr07: 36408184-36412710 Phaseolus vulgaris
Phvul.007G240500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36408184-36409183 Phaseolus vulgaris
Phvul.007G240500 1.0kb downstream 1.0kb downstream 4527 true Chr07: 36409184-36413710 Phaseolus vulgaris
Phvul.007G240500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36412711-36413710 Phaseolus vulgaris
Phvul.007G240500 2.0kb upstream 2.0kb upstream 5527 true Chr07: 36407184-36412710 Phaseolus vulgaris
Phvul.007G240500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36407184-36409183 Phaseolus vulgaris
Phvul.007G240500 2.0kb downstream 2.0kb downstream 5527 true Chr07: 36409184-36414710 Phaseolus vulgaris
Phvul.007G240500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36412711-36414710 Phaseolus vulgaris
Phvul.007G240500 5.0kb upstream 5.0kb upstream 8527 true Chr07: 36404184-36412710 Phaseolus vulgaris
Phvul.007G240500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36404184-36409183 Phaseolus vulgaris
Phvul.007G240500 5.0kb downstream 5.0kb downstream 8527 true Chr07: 36409184-36417710 Phaseolus vulgaris
Phvul.007G240500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36412711-36417710 Phaseolus vulgaris
Phvul.007G240500 10.0kb upstream 10.0kb upstream 13527 true Chr07: 36399184-36412710 Phaseolus vulgaris
Phvul.007G240500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36399184-36409183 Phaseolus vulgaris
Phvul.007G240500 10.0kb downstream 10.0kb downstream 13527 true Chr07: 36409184-36422710 Phaseolus vulgaris
Phvul.007G240500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36412711-36422710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310409 5265 Fabidae View MSA
124062939 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.6387 0.0 155.074 High  
cufflinks 34.1981 0.0 88.6069 High  
cufflinks 205.586 0.0 589.49 High High
cufflinks 39.8672 0.0 103.071 High  
cufflinks 28.4006 0.0 73.9289    
cufflinks 94.268 0.0 250.612 High  
cufflinks 3.92792 0.0 12.1993   Low
cufflinks 3.82936 0.0 11.9715   Low
cufflinks 3.64663 0.0 11.4165   Low
cufflinks 44.4107 0.0 114.799 High  
cufflinks 20.6175 0.0 54.5439    

0 Strain