Gene : Phvul.005G095900 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  957
Name:  ? Phvul.005G095900 Secondary Identifier:  ? PAC:37153136
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris BRANCHED-CHAIN-AA-SYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris ILEUSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3001 Phaseolus vulgaris pathologic  
Pvulgaris VALSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G095900 0.5kb upstream 0.5kb upstream 4390 true Chr05: 29932041-29936430 Phaseolus vulgaris
Phvul.005G095900 0.5kb upstream 0.5kb upstream 500 false Chr05: 29935931-29936430 Phaseolus vulgaris
Phvul.005G095900 0.5kb downstream 0.5kb downstream 4390 true Chr05: 29931541-29935930 Phaseolus vulgaris
Phvul.005G095900 0.5kb downstream 0.5kb downstream 500 false Chr05: 29931541-29932040 Phaseolus vulgaris
Phvul.005G095900 1.0kb upstream 1.0kb upstream 4890 true Chr05: 29932041-29936930 Phaseolus vulgaris
Phvul.005G095900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29935931-29936930 Phaseolus vulgaris
Phvul.005G095900 1.0kb downstream 1.0kb downstream 4890 true Chr05: 29931041-29935930 Phaseolus vulgaris
Phvul.005G095900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29931041-29932040 Phaseolus vulgaris
Phvul.005G095900 2.0kb upstream 2.0kb upstream 5890 true Chr05: 29932041-29937930 Phaseolus vulgaris
Phvul.005G095900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29935931-29937930 Phaseolus vulgaris
Phvul.005G095900 2.0kb downstream 2.0kb downstream 5890 true Chr05: 29930041-29935930 Phaseolus vulgaris
Phvul.005G095900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29930041-29932040 Phaseolus vulgaris
Phvul.005G095900 5.0kb upstream 5.0kb upstream 8890 true Chr05: 29932041-29940930 Phaseolus vulgaris
Phvul.005G095900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29935931-29940930 Phaseolus vulgaris
Phvul.005G095900 5.0kb downstream 5.0kb downstream 8890 true Chr05: 29927041-29935930 Phaseolus vulgaris
Phvul.005G095900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29927041-29932040 Phaseolus vulgaris
Phvul.005G095900 10.0kb upstream 10.0kb upstream 13890 true Chr05: 29932041-29945930 Phaseolus vulgaris
Phvul.005G095900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29935931-29945930 Phaseolus vulgaris
Phvul.005G095900 10.0kb downstream 10.0kb downstream 13890 true Chr05: 29922041-29935930 Phaseolus vulgaris
Phvul.005G095900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29922041-29932040 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299493 5265 Fabidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.328 0.0 573.548 High  
cufflinks 211.003 0.0 963.107 High High
cufflinks 168.699 0.0 695.195 High  
cufflinks 166.02 0.0 687.097 High  
cufflinks 193.712 0.0 845.329 High  
cufflinks 163.562 0.0 674.731 High  
cufflinks 135.269 0.0 520.997 High Low
cufflinks 120.858 0.0 520.439 High Low
cufflinks 164.603 0.0 676.479 High  
cufflinks 190.5 0.0 830.884 High  
cufflinks 203.28 0.0 907.298 High High

0 Strain