Gene : Phvul.005G096200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Genomic Order:  960
Name:  ? Phvul.005G096200 Secondary Identifier:  ? PAC:37152593
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G096200 0.5kb upstream 0.5kb upstream 4203 true Chr05: 29977763-29981965 Phaseolus vulgaris
Phvul.005G096200 0.5kb upstream 0.5kb upstream 500 false Chr05: 29977763-29978262 Phaseolus vulgaris
Phvul.005G096200 0.5kb downstream 0.5kb downstream 4203 true Chr05: 29978263-29982465 Phaseolus vulgaris
Phvul.005G096200 0.5kb downstream 0.5kb downstream 500 false Chr05: 29981966-29982465 Phaseolus vulgaris
Phvul.005G096200 1.0kb upstream 1.0kb upstream 4703 true Chr05: 29977263-29981965 Phaseolus vulgaris
Phvul.005G096200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29977263-29978262 Phaseolus vulgaris
Phvul.005G096200 1.0kb downstream 1.0kb downstream 4703 true Chr05: 29978263-29982965 Phaseolus vulgaris
Phvul.005G096200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29981966-29982965 Phaseolus vulgaris
Phvul.005G096200 2.0kb upstream 2.0kb upstream 5703 true Chr05: 29976263-29981965 Phaseolus vulgaris
Phvul.005G096200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29976263-29978262 Phaseolus vulgaris
Phvul.005G096200 2.0kb downstream 2.0kb downstream 5703 true Chr05: 29978263-29983965 Phaseolus vulgaris
Phvul.005G096200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29981966-29983965 Phaseolus vulgaris
Phvul.005G096200 5.0kb upstream 5.0kb upstream 8703 true Chr05: 29973263-29981965 Phaseolus vulgaris
Phvul.005G096200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29973263-29978262 Phaseolus vulgaris
Phvul.005G096200 5.0kb downstream 5.0kb downstream 8703 true Chr05: 29978263-29986965 Phaseolus vulgaris
Phvul.005G096200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29981966-29986965 Phaseolus vulgaris
Phvul.005G096200 10.0kb upstream 10.0kb upstream 13703 true Chr05: 29968263-29981965 Phaseolus vulgaris
Phvul.005G096200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29968263-29978262 Phaseolus vulgaris
Phvul.005G096200 10.0kb downstream 10.0kb downstream 13703 true Chr05: 29978263-29991965 Phaseolus vulgaris
Phvul.005G096200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29981966-29991965 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299240 5265 Fabidae View MSA
124062840 5270 Rosid View MSA
123739280 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.241 0.0 91.1502 High  
cufflinks 6.77942 0.0 19.1973   Low
cufflinks 23.4768 0.0 60.8466    
cufflinks 49.9265 0.0 130.234 High  
cufflinks 20.026 0.0 52.3005    
cufflinks 22.382 0.0 58.1149    
cufflinks 42.0012 0.0 109.022 High  
cufflinks 37.699 0.0 97.6393 High  
cufflinks 43.551 0.0 113.147 High  
cufflinks 2.86614 0.0 8.95695   Low
cufflinks 23.7308 0.0 61.5947    

0 Strain