Gene : Phvul.007G238800 P. vulgaris v2.1
Defline:  (1 of 1) K18010 - 7-hydroxymethyl chlorophyll a reductase (HCAR) Genomic Order:  2243
Name:  ? Phvul.007G238800 Secondary Identifier:  ? PAC:37167070
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5068 Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G238800 0.5kb upstream 0.5kb upstream 8305 true Chr07: 36252164-36260468 Phaseolus vulgaris
Phvul.007G238800 0.5kb upstream 0.5kb upstream 500 false Chr07: 36252164-36252663 Phaseolus vulgaris
Phvul.007G238800 0.5kb downstream 0.5kb downstream 8305 true Chr07: 36252664-36260968 Phaseolus vulgaris
Phvul.007G238800 0.5kb downstream 0.5kb downstream 500 false Chr07: 36260469-36260968 Phaseolus vulgaris
Phvul.007G238800 1.0kb upstream 1.0kb upstream 8805 true Chr07: 36251664-36260468 Phaseolus vulgaris
Phvul.007G238800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36251664-36252663 Phaseolus vulgaris
Phvul.007G238800 1.0kb downstream 1.0kb downstream 8805 true Chr07: 36252664-36261468 Phaseolus vulgaris
Phvul.007G238800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36260469-36261468 Phaseolus vulgaris
Phvul.007G238800 2.0kb upstream 2.0kb upstream 9805 true Chr07: 36250664-36260468 Phaseolus vulgaris
Phvul.007G238800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36250664-36252663 Phaseolus vulgaris
Phvul.007G238800 2.0kb downstream 2.0kb downstream 9805 true Chr07: 36252664-36262468 Phaseolus vulgaris
Phvul.007G238800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36260469-36262468 Phaseolus vulgaris
Phvul.007G238800 5.0kb upstream 5.0kb upstream 12805 true Chr07: 36247664-36260468 Phaseolus vulgaris
Phvul.007G238800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36247664-36252663 Phaseolus vulgaris
Phvul.007G238800 5.0kb downstream 5.0kb downstream 12805 true Chr07: 36252664-36265468 Phaseolus vulgaris
Phvul.007G238800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36260469-36265468 Phaseolus vulgaris
Phvul.007G238800 10.0kb upstream 10.0kb upstream 17805 true Chr07: 36242664-36260468 Phaseolus vulgaris
Phvul.007G238800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36242664-36252663 Phaseolus vulgaris
Phvul.007G238800 10.0kb downstream 10.0kb downstream 17805 true Chr07: 36252664-36270468 Phaseolus vulgaris
Phvul.007G238800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36260469-36270468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308112 5265 Fabidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.3194 0.0 99.0223    
cufflinks 14.2668 0.0 50.0352    
cufflinks 46.309 0.0 177.219 High High
cufflinks 10.5269 0.0 56.4946    
cufflinks 7.71946 0.0 38.7448    
cufflinks 25.8906 0.0 85.1016    
cufflinks 1.86355 0.0 9.47914   Low
cufflinks 1.48098 0.0 5.52394   Low
cufflinks 1.02043 0.0 7.11618   Low
cufflinks 14.2125 0.0 57.5357    
cufflinks 5.90433 0.0 27.5312    

0 Strain