Gene : Phvul.007G238900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23023:SF141 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED Genomic Order:  2244
Name:  ? Phvul.007G238900 Secondary Identifier:  ? PAC:37166449
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWYDQC-4 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G238900 0.5kb upstream 0.5kb upstream 2905 true Chr07: 36272736-36275640 Phaseolus vulgaris
Phvul.007G238900 0.5kb upstream 0.5kb upstream 500 false Chr07: 36275141-36275640 Phaseolus vulgaris
Phvul.007G238900 0.5kb downstream 0.5kb downstream 2905 true Chr07: 36272236-36275140 Phaseolus vulgaris
Phvul.007G238900 0.5kb downstream 0.5kb downstream 500 false Chr07: 36272236-36272735 Phaseolus vulgaris
Phvul.007G238900 1.0kb upstream 1.0kb upstream 3405 true Chr07: 36272736-36276140 Phaseolus vulgaris
Phvul.007G238900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36275141-36276140 Phaseolus vulgaris
Phvul.007G238900 1.0kb downstream 1.0kb downstream 3405 true Chr07: 36271736-36275140 Phaseolus vulgaris
Phvul.007G238900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36271736-36272735 Phaseolus vulgaris
Phvul.007G238900 2.0kb upstream 2.0kb upstream 4405 true Chr07: 36272736-36277140 Phaseolus vulgaris
Phvul.007G238900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36275141-36277140 Phaseolus vulgaris
Phvul.007G238900 2.0kb downstream 2.0kb downstream 4405 true Chr07: 36270736-36275140 Phaseolus vulgaris
Phvul.007G238900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36270736-36272735 Phaseolus vulgaris
Phvul.007G238900 5.0kb upstream 5.0kb upstream 7405 true Chr07: 36272736-36280140 Phaseolus vulgaris
Phvul.007G238900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36275141-36280140 Phaseolus vulgaris
Phvul.007G238900 5.0kb downstream 5.0kb downstream 7405 true Chr07: 36267736-36275140 Phaseolus vulgaris
Phvul.007G238900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36267736-36272735 Phaseolus vulgaris
Phvul.007G238900 10.0kb upstream 10.0kb upstream 12405 true Chr07: 36272736-36285140 Phaseolus vulgaris
Phvul.007G238900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36275141-36285140 Phaseolus vulgaris
Phvul.007G238900 10.0kb downstream 10.0kb downstream 12405 true Chr07: 36262736-36275140 Phaseolus vulgaris
Phvul.007G238900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36262736-36272735 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308487 5265 Fabidae View MSA
124073695 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0205353 0.0 0.101773 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.067088 0.0 0.293483 Low  
cufflinks 0.0164835 0.0 0.0834599 Low  
cufflinks 0.597147 0.0 2.18278   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0208051 0.0 0.103215 Low  

0 Strain