Gene : Phvul.007G241600 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  2269
Name:  ? Phvul.007G241600 Secondary Identifier:  ? PAC:37164932
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G241600 0.5kb upstream 0.5kb upstream 1655 true Chr07: 36503077-36504731 Phaseolus vulgaris
Phvul.007G241600 0.5kb upstream 0.5kb upstream 500 false Chr07: 36503077-36503576 Phaseolus vulgaris
Phvul.007G241600 0.5kb downstream 0.5kb downstream 1655 true Chr07: 36503577-36505231 Phaseolus vulgaris
Phvul.007G241600 0.5kb downstream 0.5kb downstream 500 false Chr07: 36504732-36505231 Phaseolus vulgaris
Phvul.007G241600 1.0kb upstream 1.0kb upstream 2155 true Chr07: 36502577-36504731 Phaseolus vulgaris
Phvul.007G241600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36502577-36503576 Phaseolus vulgaris
Phvul.007G241600 1.0kb downstream 1.0kb downstream 2155 true Chr07: 36503577-36505731 Phaseolus vulgaris
Phvul.007G241600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36504732-36505731 Phaseolus vulgaris
Phvul.007G241600 2.0kb upstream 2.0kb upstream 3155 true Chr07: 36501577-36504731 Phaseolus vulgaris
Phvul.007G241600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36501577-36503576 Phaseolus vulgaris
Phvul.007G241600 2.0kb downstream 2.0kb downstream 3155 true Chr07: 36503577-36506731 Phaseolus vulgaris
Phvul.007G241600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36504732-36506731 Phaseolus vulgaris
Phvul.007G241600 5.0kb upstream 5.0kb upstream 6155 true Chr07: 36498577-36504731 Phaseolus vulgaris
Phvul.007G241600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36498577-36503576 Phaseolus vulgaris
Phvul.007G241600 5.0kb downstream 5.0kb downstream 6155 true Chr07: 36503577-36509731 Phaseolus vulgaris
Phvul.007G241600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36504732-36509731 Phaseolus vulgaris
Phvul.007G241600 10.0kb upstream 10.0kb upstream 11155 true Chr07: 36493577-36504731 Phaseolus vulgaris
Phvul.007G241600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36493577-36503576 Phaseolus vulgaris
Phvul.007G241600 10.0kb downstream 10.0kb downstream 11155 true Chr07: 36503577-36514731 Phaseolus vulgaris
Phvul.007G241600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36504732-36514731 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314182 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.9075 0.0 95.4124 High  
cufflinks 18.166 0.0 48.3101    
cufflinks 8.12495 0.0 23.0814   Low
cufflinks 11.813 0.0 32.7071    
cufflinks 21.789 0.0 57.5469    
cufflinks 7.17706 0.0 20.684   Low
cufflinks 130.632 0.0 361.772 High High
cufflinks 87.24 0.0 233.127 High High
cufflinks 27.4649 0.0 71.3691    
cufflinks 187.737 0.0 536.369 High High
cufflinks 15.0592 0.0 40.7939    

0 Strain