Gene : Phvul.005G097800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  976
Name:  ? Phvul.005G097800 Secondary Identifier:  ? PAC:37154255
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G097800 0.5kb upstream 0.5kb upstream 5153 true Chr05: 30342614-30347766 Phaseolus vulgaris
Phvul.005G097800 0.5kb upstream 0.5kb upstream 500 false Chr05: 30347267-30347766 Phaseolus vulgaris
Phvul.005G097800 0.5kb downstream 0.5kb downstream 5153 true Chr05: 30342114-30347266 Phaseolus vulgaris
Phvul.005G097800 0.5kb downstream 0.5kb downstream 500 false Chr05: 30342114-30342613 Phaseolus vulgaris
Phvul.005G097800 1.0kb upstream 1.0kb upstream 5653 true Chr05: 30342614-30348266 Phaseolus vulgaris
Phvul.005G097800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 30347267-30348266 Phaseolus vulgaris
Phvul.005G097800 1.0kb downstream 1.0kb downstream 5653 true Chr05: 30341614-30347266 Phaseolus vulgaris
Phvul.005G097800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 30341614-30342613 Phaseolus vulgaris
Phvul.005G097800 2.0kb upstream 2.0kb upstream 6653 true Chr05: 30342614-30349266 Phaseolus vulgaris
Phvul.005G097800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 30347267-30349266 Phaseolus vulgaris
Phvul.005G097800 2.0kb downstream 2.0kb downstream 6653 true Chr05: 30340614-30347266 Phaseolus vulgaris
Phvul.005G097800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 30340614-30342613 Phaseolus vulgaris
Phvul.005G097800 5.0kb upstream 5.0kb upstream 9653 true Chr05: 30342614-30352266 Phaseolus vulgaris
Phvul.005G097800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 30347267-30352266 Phaseolus vulgaris
Phvul.005G097800 5.0kb downstream 5.0kb downstream 9653 true Chr05: 30337614-30347266 Phaseolus vulgaris
Phvul.005G097800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 30337614-30342613 Phaseolus vulgaris
Phvul.005G097800 10.0kb upstream 10.0kb upstream 14653 true Chr05: 30342614-30357266 Phaseolus vulgaris
Phvul.005G097800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 30347267-30357266 Phaseolus vulgaris
Phvul.005G097800 10.0kb downstream 10.0kb downstream 14653 true Chr05: 30332614-30347266 Phaseolus vulgaris
Phvul.005G097800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 30332614-30342613 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46439 0.0 4.71623    
cufflinks 2.48672 0.0 7.53059    
cufflinks 38.4264 0.0 101.188 High High
cufflinks 11.7698 0.0 31.041    
cufflinks 4.08528 0.0 11.7944    
cufflinks 11.8831 0.0 31.1454    
cufflinks 3.41298 0.0 9.9208    
cufflinks 0.86975 0.0 2.94553    
cufflinks 15.109 0.0 39.215    
cufflinks 0.00824369 0.0 0.0440946 Low Low
cufflinks 2.83097 0.0 8.49063    

0 Strain