Gene : Phvul.005G083900 P. vulgaris v2.1
Defline:  (1 of 14) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  839
Name:  ? Phvul.005G083900 Secondary Identifier:  ? PAC:37153391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G083900 0.5kb upstream 0.5kb upstream 2859 true Chr05: 21924243-21927101 Phaseolus vulgaris
Phvul.005G083900 0.5kb upstream 0.5kb upstream 500 false Chr05: 21926602-21927101 Phaseolus vulgaris
Phvul.005G083900 0.5kb downstream 0.5kb downstream 2859 true Chr05: 21923743-21926601 Phaseolus vulgaris
Phvul.005G083900 0.5kb downstream 0.5kb downstream 500 false Chr05: 21923743-21924242 Phaseolus vulgaris
Phvul.005G083900 1.0kb upstream 1.0kb upstream 3359 true Chr05: 21924243-21927601 Phaseolus vulgaris
Phvul.005G083900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21926602-21927601 Phaseolus vulgaris
Phvul.005G083900 1.0kb downstream 1.0kb downstream 3359 true Chr05: 21923243-21926601 Phaseolus vulgaris
Phvul.005G083900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21923243-21924242 Phaseolus vulgaris
Phvul.005G083900 2.0kb upstream 2.0kb upstream 4359 true Chr05: 21924243-21928601 Phaseolus vulgaris
Phvul.005G083900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21926602-21928601 Phaseolus vulgaris
Phvul.005G083900 2.0kb downstream 2.0kb downstream 4359 true Chr05: 21922243-21926601 Phaseolus vulgaris
Phvul.005G083900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21922243-21924242 Phaseolus vulgaris
Phvul.005G083900 5.0kb upstream 5.0kb upstream 7359 true Chr05: 21924243-21931601 Phaseolus vulgaris
Phvul.005G083900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21926602-21931601 Phaseolus vulgaris
Phvul.005G083900 5.0kb downstream 5.0kb downstream 7359 true Chr05: 21919243-21926601 Phaseolus vulgaris
Phvul.005G083900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21919243-21924242 Phaseolus vulgaris
Phvul.005G083900 10.0kb upstream 10.0kb upstream 12359 true Chr05: 21924243-21936601 Phaseolus vulgaris
Phvul.005G083900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21926602-21936601 Phaseolus vulgaris
Phvul.005G083900 10.0kb downstream 10.0kb downstream 12359 true Chr05: 21914243-21926601 Phaseolus vulgaris
Phvul.005G083900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21914243-21924242 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
122308771 5265 Fabidae View MSA
124066050 5270 Rosid View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1707 0.0 71.4906   Low
cufflinks 74.4554 0.0 193.727 High  
cufflinks 80.6737 0.0 210.66 High  
cufflinks 155.823 0.0 423.77 High  
cufflinks 173.79 0.0 478.701 High  
cufflinks 91.5192 0.0 240.405 High  
cufflinks 142.316 0.0 386.422 High  
cufflinks 93.6854 0.0 246.965 High  
cufflinks 101.604 0.0 267.875 High  
cufflinks 101.374 0.0 267.657 High  
cufflinks 278.828 0.0 812.541 High High

0 Strain