Gene : Phvul.007G231200 P. vulgaris v2.1
Defline:  (1 of 3) K02985 - small subunit ribosomal protein S3e (RP-S3e, RPS3) Genomic Order:  2169
Name:  ? Phvul.007G231200 Secondary Identifier:  ? PAC:37164640
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G231200 0.5kb upstream 0.5kb upstream 2702 true Chr07: 35478216-35480917 Phaseolus vulgaris
Phvul.007G231200 0.5kb upstream 0.5kb upstream 500 false Chr07: 35478216-35478715 Phaseolus vulgaris
Phvul.007G231200 0.5kb downstream 0.5kb downstream 2702 true Chr07: 35478716-35481417 Phaseolus vulgaris
Phvul.007G231200 0.5kb downstream 0.5kb downstream 500 false Chr07: 35480918-35481417 Phaseolus vulgaris
Phvul.007G231200 1.0kb upstream 1.0kb upstream 3202 true Chr07: 35477716-35480917 Phaseolus vulgaris
Phvul.007G231200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35477716-35478715 Phaseolus vulgaris
Phvul.007G231200 1.0kb downstream 1.0kb downstream 3202 true Chr07: 35478716-35481917 Phaseolus vulgaris
Phvul.007G231200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35480918-35481917 Phaseolus vulgaris
Phvul.007G231200 2.0kb upstream 2.0kb upstream 4202 true Chr07: 35476716-35480917 Phaseolus vulgaris
Phvul.007G231200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35476716-35478715 Phaseolus vulgaris
Phvul.007G231200 2.0kb downstream 2.0kb downstream 4202 true Chr07: 35478716-35482917 Phaseolus vulgaris
Phvul.007G231200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35480918-35482917 Phaseolus vulgaris
Phvul.007G231200 5.0kb upstream 5.0kb upstream 7202 true Chr07: 35473716-35480917 Phaseolus vulgaris
Phvul.007G231200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35473716-35478715 Phaseolus vulgaris
Phvul.007G231200 5.0kb downstream 5.0kb downstream 7202 true Chr07: 35478716-35485917 Phaseolus vulgaris
Phvul.007G231200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35480918-35485917 Phaseolus vulgaris
Phvul.007G231200 10.0kb upstream 10.0kb upstream 12202 true Chr07: 35468716-35480917 Phaseolus vulgaris
Phvul.007G231200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35468716-35478715 Phaseolus vulgaris
Phvul.007G231200 10.0kb downstream 10.0kb downstream 12202 true Chr07: 35478716-35490917 Phaseolus vulgaris
Phvul.007G231200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35480918-35490917 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313356 5265 Fabidae View MSA
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 129.397 0.0 359.867 High  
cufflinks 200.437 0.0 589.002 High  
cufflinks 119.25 0.0 328.281 High  
cufflinks 225.563 0.0 671.134 High High
cufflinks 194.908 0.0 566.561 High  
cufflinks 89.154 0.0 239.606 High Low
cufflinks 131.211 0.0 367.66 High  
cufflinks 142.219 0.0 400.659 High  
cufflinks 183.562 0.0 535.489 High  
cufflinks 70.015 0.0 184.653 High Low
cufflinks 173.595 0.0 500.367 High  

0 Strain