Gene : Phvul.005G084500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31719:SF34 - NAC DOMAIN-CONTAINING PROTEIN 19-RELATED Genomic Order:  844
Name:  ? Phvul.005G084500 Secondary Identifier:  ? PAC:37154188
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G084500 0.5kb upstream 0.5kb upstream 2293 true Chr05: 22051396-22053688 Phaseolus vulgaris
Phvul.005G084500 0.5kb upstream 0.5kb upstream 500 false Chr05: 22051396-22051895 Phaseolus vulgaris
Phvul.005G084500 0.5kb downstream 0.5kb downstream 2293 true Chr05: 22051896-22054188 Phaseolus vulgaris
Phvul.005G084500 0.5kb downstream 0.5kb downstream 500 false Chr05: 22053689-22054188 Phaseolus vulgaris
Phvul.005G084500 1.0kb upstream 1.0kb upstream 2793 true Chr05: 22050896-22053688 Phaseolus vulgaris
Phvul.005G084500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22050896-22051895 Phaseolus vulgaris
Phvul.005G084500 1.0kb downstream 1.0kb downstream 2793 true Chr05: 22051896-22054688 Phaseolus vulgaris
Phvul.005G084500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22053689-22054688 Phaseolus vulgaris
Phvul.005G084500 2.0kb upstream 2.0kb upstream 3793 true Chr05: 22049896-22053688 Phaseolus vulgaris
Phvul.005G084500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22049896-22051895 Phaseolus vulgaris
Phvul.005G084500 2.0kb downstream 2.0kb downstream 3793 true Chr05: 22051896-22055688 Phaseolus vulgaris
Phvul.005G084500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22053689-22055688 Phaseolus vulgaris
Phvul.005G084500 5.0kb upstream 5.0kb upstream 6793 true Chr05: 22046896-22053688 Phaseolus vulgaris
Phvul.005G084500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22046896-22051895 Phaseolus vulgaris
Phvul.005G084500 5.0kb downstream 5.0kb downstream 6793 true Chr05: 22051896-22058688 Phaseolus vulgaris
Phvul.005G084500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22053689-22058688 Phaseolus vulgaris
Phvul.005G084500 10.0kb upstream 10.0kb upstream 11793 true Chr05: 22041896-22053688 Phaseolus vulgaris
Phvul.005G084500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22041896-22051895 Phaseolus vulgaris
Phvul.005G084500 10.0kb downstream 10.0kb downstream 11793 true Chr05: 22051896-22063688 Phaseolus vulgaris
Phvul.005G084500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22053689-22063688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028132 5273 Angiosperm View MSA
122311218 5265 Fabidae View MSA
124062776 5270 Rosid View MSA
123745525 5271 Pentapetalae View MSA
122787088 5272 Eudicot View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 221.584 0.0 711.683 High High
cufflinks 52.1964 0.0 139.049 High High
cufflinks 4.192 0.0 12.2125    
cufflinks 47.9559 0.0 126.776 High High
cufflinks 4.18954 0.0 12.1392    
cufflinks 1.6383 0.0 5.27556   Low
cufflinks 3.67781 0.0 10.6962    
cufflinks 2.01492 0.0 6.2991    
cufflinks 4.53409 0.0 12.922    
cufflinks 9.10411 0.0 24.5307    
cufflinks 5.6692 0.0 15.8805    

0 Strain