Gene : Phvul.007G229800 P. vulgaris v2.1
Defline:  (1 of 2) K15200 - general transcription factor 3C polypeptide 2 (GTF3C2) Genomic Order:  2156
Name:  ? Phvul.007G229800 Secondary Identifier:  ? PAC:37166768
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G229800 0.5kb upstream 0.5kb upstream 14898 true Chr07: 35357655-35372552 Phaseolus vulgaris
Phvul.007G229800 0.5kb upstream 0.5kb upstream 500 false Chr07: 35357655-35358154 Phaseolus vulgaris
Phvul.007G229800 0.5kb downstream 0.5kb downstream 14898 true Chr07: 35358155-35373052 Phaseolus vulgaris
Phvul.007G229800 0.5kb downstream 0.5kb downstream 500 false Chr07: 35372553-35373052 Phaseolus vulgaris
Phvul.007G229800 1.0kb upstream 1.0kb upstream 15398 true Chr07: 35357155-35372552 Phaseolus vulgaris
Phvul.007G229800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35357155-35358154 Phaseolus vulgaris
Phvul.007G229800 1.0kb downstream 1.0kb downstream 15398 true Chr07: 35358155-35373552 Phaseolus vulgaris
Phvul.007G229800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35372553-35373552 Phaseolus vulgaris
Phvul.007G229800 2.0kb upstream 2.0kb upstream 16398 true Chr07: 35356155-35372552 Phaseolus vulgaris
Phvul.007G229800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35356155-35358154 Phaseolus vulgaris
Phvul.007G229800 2.0kb downstream 2.0kb downstream 16398 true Chr07: 35358155-35374552 Phaseolus vulgaris
Phvul.007G229800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35372553-35374552 Phaseolus vulgaris
Phvul.007G229800 5.0kb upstream 5.0kb upstream 19398 true Chr07: 35353155-35372552 Phaseolus vulgaris
Phvul.007G229800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35353155-35358154 Phaseolus vulgaris
Phvul.007G229800 5.0kb downstream 5.0kb downstream 19398 true Chr07: 35358155-35377552 Phaseolus vulgaris
Phvul.007G229800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35372553-35377552 Phaseolus vulgaris
Phvul.007G229800 10.0kb upstream 10.0kb upstream 24398 true Chr07: 35348155-35372552 Phaseolus vulgaris
Phvul.007G229800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35348155-35358154 Phaseolus vulgaris
Phvul.007G229800 10.0kb downstream 10.0kb downstream 24398 true Chr07: 35358155-35382552 Phaseolus vulgaris
Phvul.007G229800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35372553-35382552 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026858 5273 Angiosperm View MSA
122310918 5265 Fabidae View MSA
124063805 5270 Rosid View MSA
123737128 5271 Pentapetalae View MSA
122794531 5272 Eudicot View MSA
121347438 5274 Embryophyte View MSA
123380552 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.37046 0.0 1.60015 Low Low
cufflinks 1.40788 0.0 4.51928    
cufflinks 2.1019 0.0 7.35179   High
cufflinks 0.566379 0.0 2.2703   Low
cufflinks 0.842154 0.0 2.98724    
cufflinks 2.20035 0.0 7.67139   High
cufflinks 1.46199 0.0 4.64625    
cufflinks 1.82302 0.0 6.5648    
cufflinks 1.15204 0.0 3.77027    
cufflinks 1.40482 0.0 4.53405    
cufflinks 1.04078 0.0 3.58681    

0 Strain