Gene : Phvul.007G230450 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  2162
Name:  ? Phvul.007G230450 Secondary Identifier:  ? PAC:37164585
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G230450 0.5kb upstream 0.5kb upstream 24914 true Chr07: 35419186-35444099 Phaseolus vulgaris
Phvul.007G230450 0.5kb upstream 0.5kb upstream 500 false Chr07: 35419186-35419685 Phaseolus vulgaris
Phvul.007G230450 0.5kb downstream 0.5kb downstream 24914 true Chr07: 35419686-35444599 Phaseolus vulgaris
Phvul.007G230450 0.5kb downstream 0.5kb downstream 500 false Chr07: 35444100-35444599 Phaseolus vulgaris
Phvul.007G230450 1.0kb upstream 1.0kb upstream 25414 true Chr07: 35418686-35444099 Phaseolus vulgaris
Phvul.007G230450 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35418686-35419685 Phaseolus vulgaris
Phvul.007G230450 1.0kb downstream 1.0kb downstream 25414 true Chr07: 35419686-35445099 Phaseolus vulgaris
Phvul.007G230450 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35444100-35445099 Phaseolus vulgaris
Phvul.007G230450 2.0kb upstream 2.0kb upstream 26414 true Chr07: 35417686-35444099 Phaseolus vulgaris
Phvul.007G230450 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35417686-35419685 Phaseolus vulgaris
Phvul.007G230450 2.0kb downstream 2.0kb downstream 26414 true Chr07: 35419686-35446099 Phaseolus vulgaris
Phvul.007G230450 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35444100-35446099 Phaseolus vulgaris
Phvul.007G230450 5.0kb upstream 5.0kb upstream 29414 true Chr07: 35414686-35444099 Phaseolus vulgaris
Phvul.007G230450 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35414686-35419685 Phaseolus vulgaris
Phvul.007G230450 5.0kb downstream 5.0kb downstream 29414 true Chr07: 35419686-35449099 Phaseolus vulgaris
Phvul.007G230450 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35444100-35449099 Phaseolus vulgaris
Phvul.007G230450 10.0kb upstream 10.0kb upstream 34414 true Chr07: 35409686-35444099 Phaseolus vulgaris
Phvul.007G230450 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35409686-35419685 Phaseolus vulgaris
Phvul.007G230450 10.0kb downstream 10.0kb downstream 34414 true Chr07: 35419686-35454099 Phaseolus vulgaris
Phvul.007G230450 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35444100-35454099 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304547 5265 Fabidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.46012 0.0 16.232    
cufflinks 10.3863 0.0 28.976    
cufflinks 43.1584 0.0 140.815 High High
cufflinks 3.77957 0.0 12.0117   Low
cufflinks 6.87578 0.0 19.9267    
cufflinks 33.5205 0.0 103.724 High High
cufflinks 4.96413 0.0 14.999    
cufflinks 4.93539 0.0 14.8211    
cufflinks 5.2436 0.0 15.7782    
cufflinks 11.1183 0.0 31.0741    
cufflinks 5.99587 0.0 17.6671    

0 Strain