Gene : Phvul.005G083300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  833
Name:  ? Phvul.005G083300 Secondary Identifier:  ? PAC:37154078
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G083300 0.5kb upstream 0.5kb upstream 3054 true Chr05: 21641980-21645033 Phaseolus vulgaris
Phvul.005G083300 0.5kb upstream 0.5kb upstream 500 false Chr05: 21644534-21645033 Phaseolus vulgaris
Phvul.005G083300 0.5kb downstream 0.5kb downstream 3054 true Chr05: 21641480-21644533 Phaseolus vulgaris
Phvul.005G083300 0.5kb downstream 0.5kb downstream 500 false Chr05: 21641480-21641979 Phaseolus vulgaris
Phvul.005G083300 1.0kb upstream 1.0kb upstream 3554 true Chr05: 21641980-21645533 Phaseolus vulgaris
Phvul.005G083300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21644534-21645533 Phaseolus vulgaris
Phvul.005G083300 1.0kb downstream 1.0kb downstream 3554 true Chr05: 21640980-21644533 Phaseolus vulgaris
Phvul.005G083300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21640980-21641979 Phaseolus vulgaris
Phvul.005G083300 2.0kb upstream 2.0kb upstream 4554 true Chr05: 21641980-21646533 Phaseolus vulgaris
Phvul.005G083300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21644534-21646533 Phaseolus vulgaris
Phvul.005G083300 2.0kb downstream 2.0kb downstream 4554 true Chr05: 21639980-21644533 Phaseolus vulgaris
Phvul.005G083300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21639980-21641979 Phaseolus vulgaris
Phvul.005G083300 5.0kb upstream 5.0kb upstream 7554 true Chr05: 21641980-21649533 Phaseolus vulgaris
Phvul.005G083300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21644534-21649533 Phaseolus vulgaris
Phvul.005G083300 5.0kb downstream 5.0kb downstream 7554 true Chr05: 21636980-21644533 Phaseolus vulgaris
Phvul.005G083300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21636980-21641979 Phaseolus vulgaris
Phvul.005G083300 10.0kb upstream 10.0kb upstream 12554 true Chr05: 21641980-21654533 Phaseolus vulgaris
Phvul.005G083300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21644534-21654533 Phaseolus vulgaris
Phvul.005G083300 10.0kb downstream 10.0kb downstream 12554 true Chr05: 21631980-21644533 Phaseolus vulgaris
Phvul.005G083300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21631980-21641979 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304328 5265 Fabidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.5618 0.0 66.1194    
cufflinks 29.754 0.0 76.9109    
cufflinks 13.2184 0.0 35.0978    
cufflinks 40.4905 0.0 105.118 High High
cufflinks 27.0279 0.0 69.874    
cufflinks 23.5842 0.0 61.0733    
cufflinks 20.039 0.0 52.0973    
cufflinks 16.7417 0.0 43.9118    
cufflinks 37.0581 0.0 96.0228 High  
cufflinks 6.5184 0.0 18.408   Low
cufflinks 30.355 0.0 78.4679    

0 Strain