Gene : Phvul.005G083400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  834
Name:  ? Phvul.005G083400 Secondary Identifier:  ? PAC:37152254
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G083400 0.5kb upstream 0.5kb upstream 8009 true Chr05: 21776073-21784081 Phaseolus vulgaris
Phvul.005G083400 0.5kb upstream 0.5kb upstream 500 false Chr05: 21776073-21776572 Phaseolus vulgaris
Phvul.005G083400 0.5kb downstream 0.5kb downstream 8009 true Chr05: 21776573-21784581 Phaseolus vulgaris
Phvul.005G083400 0.5kb downstream 0.5kb downstream 500 false Chr05: 21784082-21784581 Phaseolus vulgaris
Phvul.005G083400 1.0kb upstream 1.0kb upstream 8509 true Chr05: 21775573-21784081 Phaseolus vulgaris
Phvul.005G083400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21775573-21776572 Phaseolus vulgaris
Phvul.005G083400 1.0kb downstream 1.0kb downstream 8509 true Chr05: 21776573-21785081 Phaseolus vulgaris
Phvul.005G083400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21784082-21785081 Phaseolus vulgaris
Phvul.005G083400 2.0kb upstream 2.0kb upstream 9509 true Chr05: 21774573-21784081 Phaseolus vulgaris
Phvul.005G083400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21774573-21776572 Phaseolus vulgaris
Phvul.005G083400 2.0kb downstream 2.0kb downstream 9509 true Chr05: 21776573-21786081 Phaseolus vulgaris
Phvul.005G083400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21784082-21786081 Phaseolus vulgaris
Phvul.005G083400 5.0kb upstream 5.0kb upstream 12509 true Chr05: 21771573-21784081 Phaseolus vulgaris
Phvul.005G083400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21771573-21776572 Phaseolus vulgaris
Phvul.005G083400 5.0kb downstream 5.0kb downstream 12509 true Chr05: 21776573-21789081 Phaseolus vulgaris
Phvul.005G083400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21784082-21789081 Phaseolus vulgaris
Phvul.005G083400 10.0kb upstream 10.0kb upstream 17509 true Chr05: 21766573-21784081 Phaseolus vulgaris
Phvul.005G083400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21766573-21776572 Phaseolus vulgaris
Phvul.005G083400 10.0kb downstream 10.0kb downstream 17509 true Chr05: 21776573-21794081 Phaseolus vulgaris
Phvul.005G083400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21784082-21794081 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304605 5265 Fabidae View MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 342.58 0.0 1126.82 High High
cufflinks 50.3663 0.0 142.022 High  
cufflinks 10.2002 0.0 33.3158   Low
cufflinks 25.5705 0.0 73.4192    
cufflinks 44.3035 0.0 124.118 High  
cufflinks 4.69601 0.0 16.9815   Low
cufflinks 38.6591 0.0 107.559 High  
cufflinks 48.4482 0.0 136.195 High  
cufflinks 44.4668 0.0 124.38 High  
cufflinks 119.291 0.0 379.797 High High
cufflinks 29.3854 0.0 83.0847    

0 Strain