Gene : Phvul.005G085900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR13140:SF384 - MYOSIN-2 Genomic Order:  916
Name:  ? Phvul.005G085900 Secondary Identifier:  ? PAC:37154104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G085900 0.5kb upstream 0.5kb upstream 11349 true Chr05: 27689099-27700447 Phaseolus vulgaris
Phvul.005G085900 0.5kb upstream 0.5kb upstream 500 false Chr05: 27689099-27689598 Phaseolus vulgaris
Phvul.005G085900 0.5kb downstream 0.5kb downstream 11349 true Chr05: 27689599-27700947 Phaseolus vulgaris
Phvul.005G085900 0.5kb downstream 0.5kb downstream 500 false Chr05: 27700448-27700947 Phaseolus vulgaris
Phvul.005G085900 1.0kb upstream 1.0kb upstream 11849 true Chr05: 27688599-27700447 Phaseolus vulgaris
Phvul.005G085900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27688599-27689598 Phaseolus vulgaris
Phvul.005G085900 1.0kb downstream 1.0kb downstream 11849 true Chr05: 27689599-27701447 Phaseolus vulgaris
Phvul.005G085900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27700448-27701447 Phaseolus vulgaris
Phvul.005G085900 2.0kb upstream 2.0kb upstream 12849 true Chr05: 27687599-27700447 Phaseolus vulgaris
Phvul.005G085900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27687599-27689598 Phaseolus vulgaris
Phvul.005G085900 2.0kb downstream 2.0kb downstream 12849 true Chr05: 27689599-27702447 Phaseolus vulgaris
Phvul.005G085900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27700448-27702447 Phaseolus vulgaris
Phvul.005G085900 5.0kb upstream 5.0kb upstream 15849 true Chr05: 27684599-27700447 Phaseolus vulgaris
Phvul.005G085900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27684599-27689598 Phaseolus vulgaris
Phvul.005G085900 5.0kb downstream 5.0kb downstream 15849 true Chr05: 27689599-27705447 Phaseolus vulgaris
Phvul.005G085900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27700448-27705447 Phaseolus vulgaris
Phvul.005G085900 10.0kb upstream 10.0kb upstream 20849 true Chr05: 27679599-27700447 Phaseolus vulgaris
Phvul.005G085900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27679599-27689598 Phaseolus vulgaris
Phvul.005G085900 10.0kb downstream 10.0kb downstream 20849 true Chr05: 27689599-27710447 Phaseolus vulgaris
Phvul.005G085900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27700448-27710447 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063400 5270 Rosid View MSA
122314918 5265 Fabidae View MSA
123736389 5271 Pentapetalae View MSA
122785865 5272 Eudicot View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.879593 0.0 4.58584   Low
cufflinks 2.96805 0.0 11.4193    
cufflinks 4.65812 0.0 18.6807    
cufflinks 0.895321 0.0 3.83715   Low
cufflinks 3.41276 0.0 13.0638    
cufflinks 7.03667 0.0 27.1704   High
cufflinks 3.17888 0.0 12.3664    
cufflinks 2.54498 0.0 10.3027    
cufflinks 2.70985 0.0 11.5606    
cufflinks 1.5663 0.0 7.48595    
cufflinks 3.49224 0.0 13.4043    

0 Strain