Gene : Phvul.007G233300 P. vulgaris v2.1
Defline:  (1 of 3) K02437 - glycine cleavage system H protein (gcvH, GCSH) Genomic Order:  2189
Name:  ? Phvul.007G233300 Secondary Identifier:  ? PAC:37166927
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G233300 0.5kb upstream 0.5kb upstream 2788 true Chr07: 35707298-35710085 Phaseolus vulgaris
Phvul.007G233300 0.5kb upstream 0.5kb upstream 500 false Chr07: 35707298-35707797 Phaseolus vulgaris
Phvul.007G233300 0.5kb downstream 0.5kb downstream 2788 true Chr07: 35707798-35710585 Phaseolus vulgaris
Phvul.007G233300 0.5kb downstream 0.5kb downstream 500 false Chr07: 35710086-35710585 Phaseolus vulgaris
Phvul.007G233300 1.0kb upstream 1.0kb upstream 3288 true Chr07: 35706798-35710085 Phaseolus vulgaris
Phvul.007G233300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35706798-35707797 Phaseolus vulgaris
Phvul.007G233300 1.0kb downstream 1.0kb downstream 3288 true Chr07: 35707798-35711085 Phaseolus vulgaris
Phvul.007G233300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35710086-35711085 Phaseolus vulgaris
Phvul.007G233300 2.0kb upstream 2.0kb upstream 4288 true Chr07: 35705798-35710085 Phaseolus vulgaris
Phvul.007G233300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35705798-35707797 Phaseolus vulgaris
Phvul.007G233300 2.0kb downstream 2.0kb downstream 4288 true Chr07: 35707798-35712085 Phaseolus vulgaris
Phvul.007G233300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35710086-35712085 Phaseolus vulgaris
Phvul.007G233300 5.0kb upstream 5.0kb upstream 7288 true Chr07: 35702798-35710085 Phaseolus vulgaris
Phvul.007G233300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35702798-35707797 Phaseolus vulgaris
Phvul.007G233300 5.0kb downstream 5.0kb downstream 7288 true Chr07: 35707798-35715085 Phaseolus vulgaris
Phvul.007G233300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35710086-35715085 Phaseolus vulgaris
Phvul.007G233300 10.0kb upstream 10.0kb upstream 12288 true Chr07: 35697798-35710085 Phaseolus vulgaris
Phvul.007G233300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35697798-35707797 Phaseolus vulgaris
Phvul.007G233300 10.0kb downstream 10.0kb downstream 12288 true Chr07: 35707798-35720085 Phaseolus vulgaris
Phvul.007G233300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35710086-35720085 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314800 5265 Fabidae View MSA
124062374 5270 Rosid View MSA
123736727 5271 Pentapetalae View MSA
122785842 5272 Eudicot View MSA
122045922 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.35 0.0 71.3851    
cufflinks 31.5956 0.0 84.301    
cufflinks 9.80893 0.0 29.08   Low
cufflinks 56.5144 0.0 146.855 High  
cufflinks 47.8727 0.0 125.162 High  
cufflinks 18.6712 0.0 52.0375    
cufflinks 47.043 0.0 122.686 High  
cufflinks 121.244 0.0 317.904 High High
cufflinks 33.5187 0.0 89.2038 High  
cufflinks 9.44185 0.0 28.3477   Low
cufflinks 70.5688 0.0 182.461 High  

0 Strain