Gene : Phvul.005G086300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33098:SF10 - T28P6.11 PROTEIN Genomic Order:  912
Name:  ? Phvul.005G086300 Secondary Identifier:  ? PAC:37154502
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G086300 0.5kb upstream 0.5kb upstream 2326 true Chr05: 27578307-27580632 Phaseolus vulgaris
Phvul.005G086300 0.5kb upstream 0.5kb upstream 500 false Chr05: 27578307-27578806 Phaseolus vulgaris
Phvul.005G086300 0.5kb downstream 0.5kb downstream 2326 true Chr05: 27578807-27581132 Phaseolus vulgaris
Phvul.005G086300 0.5kb downstream 0.5kb downstream 500 false Chr05: 27580633-27581132 Phaseolus vulgaris
Phvul.005G086300 1.0kb upstream 1.0kb upstream 2826 true Chr05: 27577807-27580632 Phaseolus vulgaris
Phvul.005G086300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27577807-27578806 Phaseolus vulgaris
Phvul.005G086300 1.0kb downstream 1.0kb downstream 2826 true Chr05: 27578807-27581632 Phaseolus vulgaris
Phvul.005G086300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27580633-27581632 Phaseolus vulgaris
Phvul.005G086300 2.0kb upstream 2.0kb upstream 3826 true Chr05: 27576807-27580632 Phaseolus vulgaris
Phvul.005G086300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27576807-27578806 Phaseolus vulgaris
Phvul.005G086300 2.0kb downstream 2.0kb downstream 3826 true Chr05: 27578807-27582632 Phaseolus vulgaris
Phvul.005G086300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27580633-27582632 Phaseolus vulgaris
Phvul.005G086300 5.0kb upstream 5.0kb upstream 6826 true Chr05: 27573807-27580632 Phaseolus vulgaris
Phvul.005G086300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27573807-27578806 Phaseolus vulgaris
Phvul.005G086300 5.0kb downstream 5.0kb downstream 6826 true Chr05: 27578807-27585632 Phaseolus vulgaris
Phvul.005G086300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27580633-27585632 Phaseolus vulgaris
Phvul.005G086300 10.0kb upstream 10.0kb upstream 11826 true Chr05: 27568807-27580632 Phaseolus vulgaris
Phvul.005G086300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27568807-27578806 Phaseolus vulgaris
Phvul.005G086300 10.0kb downstream 10.0kb downstream 11826 true Chr05: 27578807-27590632 Phaseolus vulgaris
Phvul.005G086300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27580633-27590632 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308773 5265 Fabidae View MSA
124070091 5270 Rosid View MSA
123750199 5271 Pentapetalae View MSA
122796107 5272 Eudicot View MSA
122050129 5273 Angiosperm View MSA
121311757 5274 Embryophyte View MSA
123349012 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.61049 0.0 13.1133   Low
cufflinks 22.7367 0.0 58.7702   High
cufflinks 5.34958 0.0 15.1207   Low
cufflinks 11.1656 0.0 29.4291    
cufflinks 17.3617 0.0 45.0186    
cufflinks 14.2936 0.0 37.3072    
cufflinks 9.81383 0.0 25.9898    
cufflinks 5.45995 0.0 15.3104   Low
cufflinks 17.1007 0.0 44.2645    
cufflinks 5.79198 0.0 16.2059    
cufflinks 15.1619 0.0 39.42    

0 Strain