Gene : Phvul.005G085500 P. vulgaris v2.1
Genomic Order:  854 Name:  ? Phvul.005G085500
Secondary Identifier:  ? PAC:37153045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G085500 0.5kb upstream 0.5kb upstream 872 true Chr05: 22612009-22612880 Phaseolus vulgaris
Phvul.005G085500 0.5kb upstream 0.5kb upstream 500 false Chr05: 22612009-22612508 Phaseolus vulgaris
Phvul.005G085500 0.5kb downstream 0.5kb downstream 872 true Chr05: 22612509-22613380 Phaseolus vulgaris
Phvul.005G085500 0.5kb downstream 0.5kb downstream 500 false Chr05: 22612881-22613380 Phaseolus vulgaris
Phvul.005G085500 1.0kb upstream 1.0kb upstream 1372 true Chr05: 22611509-22612880 Phaseolus vulgaris
Phvul.005G085500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22611509-22612508 Phaseolus vulgaris
Phvul.005G085500 1.0kb downstream 1.0kb downstream 1372 true Chr05: 22612509-22613880 Phaseolus vulgaris
Phvul.005G085500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22612881-22613880 Phaseolus vulgaris
Phvul.005G085500 2.0kb upstream 2.0kb upstream 2372 true Chr05: 22610509-22612880 Phaseolus vulgaris
Phvul.005G085500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22610509-22612508 Phaseolus vulgaris
Phvul.005G085500 2.0kb downstream 2.0kb downstream 2372 true Chr05: 22612509-22614880 Phaseolus vulgaris
Phvul.005G085500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22612881-22614880 Phaseolus vulgaris
Phvul.005G085500 5.0kb upstream 5.0kb upstream 5372 true Chr05: 22607509-22612880 Phaseolus vulgaris
Phvul.005G085500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22607509-22612508 Phaseolus vulgaris
Phvul.005G085500 5.0kb downstream 5.0kb downstream 5372 true Chr05: 22612509-22617880 Phaseolus vulgaris
Phvul.005G085500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22612881-22617880 Phaseolus vulgaris
Phvul.005G085500 10.0kb upstream 10.0kb upstream 10372 true Chr05: 22602509-22612880 Phaseolus vulgaris
Phvul.005G085500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22602509-22612508 Phaseolus vulgaris
Phvul.005G085500 10.0kb downstream 10.0kb downstream 10372 true Chr05: 22612509-22622880 Phaseolus vulgaris
Phvul.005G085500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22612881-22622880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309967 5265 Fabidae View MSA
124074706 5270 Rosid View MSA
123747568 5271 Pentapetalae View MSA
122796436 5272 Eudicot View MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23763 0.0 5.06891    
cufflinks 1.75433 0.0 6.97068    
cufflinks 2.0664 0.0 8.10386   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.660165 0.0 2.84856    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.136373 0.0 0.690489 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.561237 0.0 2.4721    
cufflinks 0.680198 0.0 2.92737    

0 Strain