Gene : Phvul.005G086500 P. vulgaris v2.1
Genomic Order:  869 Name:  ? Phvul.005G086500
Secondary Identifier:  ? PAC:37153039
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G086500 0.5kb upstream 0.5kb upstream 4722 true Chr05: 24883672-24888393 Phaseolus vulgaris
Phvul.005G086500 0.5kb upstream 0.5kb upstream 500 false Chr05: 24883672-24884171 Phaseolus vulgaris
Phvul.005G086500 0.5kb downstream 0.5kb downstream 4722 true Chr05: 24884172-24888893 Phaseolus vulgaris
Phvul.005G086500 0.5kb downstream 0.5kb downstream 500 false Chr05: 24888394-24888893 Phaseolus vulgaris
Phvul.005G086500 1.0kb upstream 1.0kb upstream 5222 true Chr05: 24883172-24888393 Phaseolus vulgaris
Phvul.005G086500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24883172-24884171 Phaseolus vulgaris
Phvul.005G086500 1.0kb downstream 1.0kb downstream 5222 true Chr05: 24884172-24889393 Phaseolus vulgaris
Phvul.005G086500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24888394-24889393 Phaseolus vulgaris
Phvul.005G086500 2.0kb upstream 2.0kb upstream 6222 true Chr05: 24882172-24888393 Phaseolus vulgaris
Phvul.005G086500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24882172-24884171 Phaseolus vulgaris
Phvul.005G086500 2.0kb downstream 2.0kb downstream 6222 true Chr05: 24884172-24890393 Phaseolus vulgaris
Phvul.005G086500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24888394-24890393 Phaseolus vulgaris
Phvul.005G086500 5.0kb upstream 5.0kb upstream 9222 true Chr05: 24879172-24888393 Phaseolus vulgaris
Phvul.005G086500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24879172-24884171 Phaseolus vulgaris
Phvul.005G086500 5.0kb downstream 5.0kb downstream 9222 true Chr05: 24884172-24893393 Phaseolus vulgaris
Phvul.005G086500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24888394-24893393 Phaseolus vulgaris
Phvul.005G086500 10.0kb upstream 10.0kb upstream 14222 true Chr05: 24874172-24888393 Phaseolus vulgaris
Phvul.005G086500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24874172-24884171 Phaseolus vulgaris
Phvul.005G086500 10.0kb downstream 10.0kb downstream 14222 true Chr05: 24884172-24898393 Phaseolus vulgaris
Phvul.005G086500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 24888394-24898393 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026569 5273 Angiosperm View MSA
122305209 5265 Fabidae View MSA
124068648 5270 Rosid View MSA
123737361 5271 Pentapetalae View MSA
122787505 5272 Eudicot View MSA
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5202 0.0 28.8279    
cufflinks 13.0982 0.0 35.3436    
cufflinks 25.0001 0.0 64.8796   High
cufflinks 7.9056 0.0 22.5196    
cufflinks 7.88149 0.0 22.3382    
cufflinks 12.3614 0.0 33.4802    
cufflinks 2.77696 0.0 8.79672   Low
cufflinks 3.34306 0.0 10.3232   Low
cufflinks 2.43794 0.0 7.86418   Low
cufflinks 20.0666 0.0 52.6171   High
cufflinks 6.17522 0.0 17.9331    

0 Strain