Gene : Phvul.007G220300 P. vulgaris v2.1
Defline:  (1 of 6) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  2061
Name:  ? Phvul.007G220300 Secondary Identifier:  ? PAC:37165589
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G220300 0.5kb upstream 0.5kb upstream 1244 true Chr07: 34342331-34343574 Phaseolus vulgaris
Phvul.007G220300 0.5kb upstream 0.5kb upstream 500 false Chr07: 34342331-34342830 Phaseolus vulgaris
Phvul.007G220300 0.5kb downstream 0.5kb downstream 1244 true Chr07: 34342831-34344074 Phaseolus vulgaris
Phvul.007G220300 0.5kb downstream 0.5kb downstream 500 false Chr07: 34343575-34344074 Phaseolus vulgaris
Phvul.007G220300 1.0kb upstream 1.0kb upstream 1744 true Chr07: 34341831-34343574 Phaseolus vulgaris
Phvul.007G220300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34341831-34342830 Phaseolus vulgaris
Phvul.007G220300 1.0kb downstream 1.0kb downstream 1744 true Chr07: 34342831-34344574 Phaseolus vulgaris
Phvul.007G220300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34343575-34344574 Phaseolus vulgaris
Phvul.007G220300 2.0kb upstream 2.0kb upstream 2744 true Chr07: 34340831-34343574 Phaseolus vulgaris
Phvul.007G220300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34340831-34342830 Phaseolus vulgaris
Phvul.007G220300 2.0kb downstream 2.0kb downstream 2744 true Chr07: 34342831-34345574 Phaseolus vulgaris
Phvul.007G220300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34343575-34345574 Phaseolus vulgaris
Phvul.007G220300 5.0kb upstream 5.0kb upstream 5744 true Chr07: 34337831-34343574 Phaseolus vulgaris
Phvul.007G220300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34337831-34342830 Phaseolus vulgaris
Phvul.007G220300 5.0kb downstream 5.0kb downstream 5744 true Chr07: 34342831-34348574 Phaseolus vulgaris
Phvul.007G220300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34343575-34348574 Phaseolus vulgaris
Phvul.007G220300 10.0kb upstream 10.0kb upstream 10744 true Chr07: 34332831-34343574 Phaseolus vulgaris
Phvul.007G220300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34332831-34342830 Phaseolus vulgaris
Phvul.007G220300 10.0kb downstream 10.0kb downstream 10744 true Chr07: 34342831-34353574 Phaseolus vulgaris
Phvul.007G220300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34343575-34353574 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299563 5265 Fabidae View MSA
124068553 5270 Rosid View MSA
123746729 5271 Pentapetalae View MSA
122788263 5272 Eudicot View MSA
122050201 5273 Angiosperm View MSA
121345263 5274 Embryophyte View MSA
123424135 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.3037 0.0 206.496 High  
cufflinks 137.779 0.0 371.883 High High
cufflinks 32.4876 0.0 85.2345   Low
cufflinks 112.589 0.0 300.108 High High
cufflinks 93.2142 0.0 244.777 High  
cufflinks 32.63 0.0 85.3012   Low
cufflinks 51.7137 0.0 133.717 High  
cufflinks 69.546 0.0 180.379 High  
cufflinks 82.8563 0.0 217.357 High  
cufflinks 35.7274 0.0 92.9607   Low
cufflinks 93.0005 0.0 244.953 High  

0 Strain