Gene : Phvul.007G219800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC Genomic Order:  2056
Name:  ? Phvul.007G219800 Secondary Identifier:  ? PAC:37165289
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G219800 0.5kb upstream 0.5kb upstream 5066 true Chr07: 34298246-34303311 Phaseolus vulgaris
Phvul.007G219800 0.5kb upstream 0.5kb upstream 500 false Chr07: 34302812-34303311 Phaseolus vulgaris
Phvul.007G219800 0.5kb downstream 0.5kb downstream 5066 true Chr07: 34297746-34302811 Phaseolus vulgaris
Phvul.007G219800 0.5kb downstream 0.5kb downstream 500 false Chr07: 34297746-34298245 Phaseolus vulgaris
Phvul.007G219800 1.0kb upstream 1.0kb upstream 5566 true Chr07: 34298246-34303811 Phaseolus vulgaris
Phvul.007G219800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34302812-34303811 Phaseolus vulgaris
Phvul.007G219800 1.0kb downstream 1.0kb downstream 5566 true Chr07: 34297246-34302811 Phaseolus vulgaris
Phvul.007G219800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34297246-34298245 Phaseolus vulgaris
Phvul.007G219800 2.0kb upstream 2.0kb upstream 6566 true Chr07: 34298246-34304811 Phaseolus vulgaris
Phvul.007G219800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34302812-34304811 Phaseolus vulgaris
Phvul.007G219800 2.0kb downstream 2.0kb downstream 6566 true Chr07: 34296246-34302811 Phaseolus vulgaris
Phvul.007G219800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34296246-34298245 Phaseolus vulgaris
Phvul.007G219800 5.0kb upstream 5.0kb upstream 9566 true Chr07: 34298246-34307811 Phaseolus vulgaris
Phvul.007G219800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34302812-34307811 Phaseolus vulgaris
Phvul.007G219800 5.0kb downstream 5.0kb downstream 9566 true Chr07: 34293246-34302811 Phaseolus vulgaris
Phvul.007G219800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34293246-34298245 Phaseolus vulgaris
Phvul.007G219800 10.0kb upstream 10.0kb upstream 14566 true Chr07: 34298246-34312811 Phaseolus vulgaris
Phvul.007G219800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34302812-34312811 Phaseolus vulgaris
Phvul.007G219800 10.0kb downstream 10.0kb downstream 14566 true Chr07: 34288246-34302811 Phaseolus vulgaris
Phvul.007G219800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34288246-34298245 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299597 5265 Fabidae View MSA
124066253 5270 Rosid View MSA
123749452 5271 Pentapetalae View MSA
122788666 5272 Eudicot View MSA
122051168 5273 Angiosperm View MSA
121346154 5274 Embryophyte View MSA
123424497 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1072 0.0 66.883    
cufflinks 17.4351 0.0 59.9163    
cufflinks 45.6766 0.0 141.044 High High
cufflinks 20.6926 0.0 69.759    
cufflinks 12.7855 0.0 47.1436    
cufflinks 29.622 0.0 93.7248   High
cufflinks 3.57609 0.0 15.1589   Low
cufflinks 5.75693 0.0 21.3886    
cufflinks 4.20198 0.0 17.2338   Low
cufflinks 16.1915 0.0 56.5249    
cufflinks 9.30796 0.0 36.9347    

0 Strain