Gene : Phvul.007G219000 P. vulgaris v2.1
Defline:  (1 of 1) K14821 - bud site selection protein 20 (BUD20) Genomic Order:  2047
Name:  ? Phvul.007G219000 Secondary Identifier:  ? PAC:37167528
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G219000 0.5kb upstream 0.5kb upstream 2065 true Chr07: 34211391-34213455 Phaseolus vulgaris
Phvul.007G219000 0.5kb upstream 0.5kb upstream 500 false Chr07: 34212956-34213455 Phaseolus vulgaris
Phvul.007G219000 0.5kb downstream 0.5kb downstream 2065 true Chr07: 34210891-34212955 Phaseolus vulgaris
Phvul.007G219000 0.5kb downstream 0.5kb downstream 500 false Chr07: 34210891-34211390 Phaseolus vulgaris
Phvul.007G219000 1.0kb upstream 1.0kb upstream 2565 true Chr07: 34211391-34213955 Phaseolus vulgaris
Phvul.007G219000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34212956-34213955 Phaseolus vulgaris
Phvul.007G219000 1.0kb downstream 1.0kb downstream 2565 true Chr07: 34210391-34212955 Phaseolus vulgaris
Phvul.007G219000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34210391-34211390 Phaseolus vulgaris
Phvul.007G219000 2.0kb upstream 2.0kb upstream 3565 true Chr07: 34211391-34214955 Phaseolus vulgaris
Phvul.007G219000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34212956-34214955 Phaseolus vulgaris
Phvul.007G219000 2.0kb downstream 2.0kb downstream 3565 true Chr07: 34209391-34212955 Phaseolus vulgaris
Phvul.007G219000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34209391-34211390 Phaseolus vulgaris
Phvul.007G219000 5.0kb upstream 5.0kb upstream 6565 true Chr07: 34211391-34217955 Phaseolus vulgaris
Phvul.007G219000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34212956-34217955 Phaseolus vulgaris
Phvul.007G219000 5.0kb downstream 5.0kb downstream 6565 true Chr07: 34206391-34212955 Phaseolus vulgaris
Phvul.007G219000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34206391-34211390 Phaseolus vulgaris
Phvul.007G219000 10.0kb upstream 10.0kb upstream 11565 true Chr07: 34211391-34222955 Phaseolus vulgaris
Phvul.007G219000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34212956-34222955 Phaseolus vulgaris
Phvul.007G219000 10.0kb downstream 10.0kb downstream 11565 true Chr07: 34201391-34212955 Phaseolus vulgaris
Phvul.007G219000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34201391-34211390 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307141 5265 Fabidae View MSA
124062225 5270 Rosid View MSA
123752309 5271 Pentapetalae View MSA
122787626 5272 Eudicot View MSA
122041921 5273 Angiosperm View MSA
123428955 5275 Viridiplantae View MSA
121346205 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.6434 0.0 73.6386   High
cufflinks 26.7839 0.0 71.6486   High
cufflinks 18.6006 0.0 51.2889    
cufflinks 26.7044 0.0 71.4126   High
cufflinks 18.8208 0.0 51.956    
cufflinks 14.1156 0.0 39.866   Low
cufflinks 19.2722 0.0 52.7846    
cufflinks 22.9219 0.0 61.8633    
cufflinks 21.1214 0.0 57.4109    
cufflinks 21.6325 0.0 58.9981    
cufflinks 22.3257 0.0 60.6858    

0 Strain