Gene : Phvul.007G226100 P. vulgaris v2.1
Defline:  (1 of 2) K12185 - ESCRT-I complex subunit VPS37 (VPS37) Genomic Order:  2119
Name:  ? Phvul.007G226100 Secondary Identifier:  ? PAC:37165785
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G226100 0.5kb upstream 0.5kb upstream 3466 true Chr07: 34944230-34947695 Phaseolus vulgaris
Phvul.007G226100 0.5kb upstream 0.5kb upstream 500 false Chr07: 34947196-34947695 Phaseolus vulgaris
Phvul.007G226100 0.5kb downstream 0.5kb downstream 3466 true Chr07: 34943730-34947195 Phaseolus vulgaris
Phvul.007G226100 0.5kb downstream 0.5kb downstream 500 false Chr07: 34943730-34944229 Phaseolus vulgaris
Phvul.007G226100 1.0kb upstream 1.0kb upstream 3966 true Chr07: 34944230-34948195 Phaseolus vulgaris
Phvul.007G226100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34947196-34948195 Phaseolus vulgaris
Phvul.007G226100 1.0kb downstream 1.0kb downstream 3966 true Chr07: 34943230-34947195 Phaseolus vulgaris
Phvul.007G226100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34943230-34944229 Phaseolus vulgaris
Phvul.007G226100 2.0kb upstream 2.0kb upstream 4966 true Chr07: 34944230-34949195 Phaseolus vulgaris
Phvul.007G226100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34947196-34949195 Phaseolus vulgaris
Phvul.007G226100 2.0kb downstream 2.0kb downstream 4966 true Chr07: 34942230-34947195 Phaseolus vulgaris
Phvul.007G226100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34942230-34944229 Phaseolus vulgaris
Phvul.007G226100 5.0kb upstream 5.0kb upstream 7966 true Chr07: 34944230-34952195 Phaseolus vulgaris
Phvul.007G226100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34947196-34952195 Phaseolus vulgaris
Phvul.007G226100 5.0kb downstream 5.0kb downstream 7966 true Chr07: 34939230-34947195 Phaseolus vulgaris
Phvul.007G226100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34939230-34944229 Phaseolus vulgaris
Phvul.007G226100 10.0kb upstream 10.0kb upstream 12966 true Chr07: 34944230-34957195 Phaseolus vulgaris
Phvul.007G226100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34947196-34957195 Phaseolus vulgaris
Phvul.007G226100 10.0kb downstream 10.0kb downstream 12966 true Chr07: 34934230-34947195 Phaseolus vulgaris
Phvul.007G226100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34934230-34944229 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254861 5265 Fabidae View MSA
124041331 5270 Rosid View MSA
123746105 5271 Pentapetalae View MSA
122791757 5272 Eudicot View MSA
122041656 5273 Angiosperm View MSA
121345177 5274 Embryophyte View MSA
123424411 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24335 0.0 4.50239    
cufflinks 0.405506 0.0 1.61124 Low Low
cufflinks 0.537261 0.0 2.08523 Low  
cufflinks 0.733567 0.0 2.78574    
cufflinks 0.699334 0.0 2.67782    
cufflinks 0.610972 0.0 2.35186    
cufflinks 5.71345 0.0 17.5314   High
cufflinks 4.20954 0.0 13.316   High
cufflinks 6.25873 0.0 18.9854   High
cufflinks 0.358873 0.0 1.443   Low
cufflinks 1.22593 0.0 4.46889    

0 Strain