Gene : Phvul.005G081800 P. vulgaris v2.1
Defline:  (1 of 42) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  797
Name:  ? Phvul.005G081800 Secondary Identifier:  ? PAC:37153341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G081800 0.5kb upstream 0.5kb upstream 1226 true Chr05: 19761069-19762294 Phaseolus vulgaris
Phvul.005G081800 0.5kb upstream 0.5kb upstream 500 false Chr05: 19761069-19761568 Phaseolus vulgaris
Phvul.005G081800 0.5kb downstream 0.5kb downstream 1226 true Chr05: 19761569-19762794 Phaseolus vulgaris
Phvul.005G081800 0.5kb downstream 0.5kb downstream 500 false Chr05: 19762295-19762794 Phaseolus vulgaris
Phvul.005G081800 1.0kb upstream 1.0kb upstream 1726 true Chr05: 19760569-19762294 Phaseolus vulgaris
Phvul.005G081800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19760569-19761568 Phaseolus vulgaris
Phvul.005G081800 1.0kb downstream 1.0kb downstream 1726 true Chr05: 19761569-19763294 Phaseolus vulgaris
Phvul.005G081800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19762295-19763294 Phaseolus vulgaris
Phvul.005G081800 2.0kb upstream 2.0kb upstream 2726 true Chr05: 19759569-19762294 Phaseolus vulgaris
Phvul.005G081800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19759569-19761568 Phaseolus vulgaris
Phvul.005G081800 2.0kb downstream 2.0kb downstream 2726 true Chr05: 19761569-19764294 Phaseolus vulgaris
Phvul.005G081800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19762295-19764294 Phaseolus vulgaris
Phvul.005G081800 5.0kb upstream 5.0kb upstream 5726 true Chr05: 19756569-19762294 Phaseolus vulgaris
Phvul.005G081800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19756569-19761568 Phaseolus vulgaris
Phvul.005G081800 5.0kb downstream 5.0kb downstream 5726 true Chr05: 19761569-19767294 Phaseolus vulgaris
Phvul.005G081800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19762295-19767294 Phaseolus vulgaris
Phvul.005G081800 10.0kb upstream 10.0kb upstream 10726 true Chr05: 19751569-19762294 Phaseolus vulgaris
Phvul.005G081800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19751569-19761568 Phaseolus vulgaris
Phvul.005G081800 10.0kb downstream 10.0kb downstream 10726 true Chr05: 19761569-19772294 Phaseolus vulgaris
Phvul.005G081800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19762295-19772294 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312458 5265 Fabidae View MSA
124063773 5270 Rosid View MSA
123750895 5271 Pentapetalae View MSA
122785947 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26129 0.0 1.12355 Low  
cufflinks 0.0595249 0.0 0.297305 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.799505 0.0 3.12258    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain