Gene : Phvul.005G082000 P. vulgaris v2.1
Genomic Order:  795 Name:  ? Phvul.005G082000
Secondary Identifier:  ? PAC:37152202
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G082000 0.5kb upstream 0.5kb upstream 14992 true Chr05: 19655907-19670898 Phaseolus vulgaris
Phvul.005G082000 0.5kb upstream 0.5kb upstream 500 false Chr05: 19670399-19670898 Phaseolus vulgaris
Phvul.005G082000 0.5kb downstream 0.5kb downstream 14992 true Chr05: 19655407-19670398 Phaseolus vulgaris
Phvul.005G082000 0.5kb downstream 0.5kb downstream 500 false Chr05: 19655407-19655906 Phaseolus vulgaris
Phvul.005G082000 1.0kb upstream 1.0kb upstream 15492 true Chr05: 19655907-19671398 Phaseolus vulgaris
Phvul.005G082000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19670399-19671398 Phaseolus vulgaris
Phvul.005G082000 1.0kb downstream 1.0kb downstream 15492 true Chr05: 19654907-19670398 Phaseolus vulgaris
Phvul.005G082000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19654907-19655906 Phaseolus vulgaris
Phvul.005G082000 2.0kb upstream 2.0kb upstream 16492 true Chr05: 19655907-19672398 Phaseolus vulgaris
Phvul.005G082000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19670399-19672398 Phaseolus vulgaris
Phvul.005G082000 2.0kb downstream 2.0kb downstream 16492 true Chr05: 19653907-19670398 Phaseolus vulgaris
Phvul.005G082000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19653907-19655906 Phaseolus vulgaris
Phvul.005G082000 5.0kb upstream 5.0kb upstream 19492 true Chr05: 19655907-19675398 Phaseolus vulgaris
Phvul.005G082000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19670399-19675398 Phaseolus vulgaris
Phvul.005G082000 5.0kb downstream 5.0kb downstream 19492 true Chr05: 19650907-19670398 Phaseolus vulgaris
Phvul.005G082000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19650907-19655906 Phaseolus vulgaris
Phvul.005G082000 10.0kb upstream 10.0kb upstream 24492 true Chr05: 19655907-19680398 Phaseolus vulgaris
Phvul.005G082000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19670399-19680398 Phaseolus vulgaris
Phvul.005G082000 10.0kb downstream 10.0kb downstream 24492 true Chr05: 19645907-19670398 Phaseolus vulgaris
Phvul.005G082000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19645907-19655906 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311011 5265 Fabidae View MSA
124062606 5270 Rosid View MSA
123737613 5271 Pentapetalae View MSA
122786141 5272 Eudicot View MSA
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.71017 0.0 45.6399    
cufflinks 13.0833 0.0 55.5578    
cufflinks 37.1097 0.0 132.283   High
cufflinks 10.941 0.0 44.5893    
cufflinks 12.0555 0.0 53.9321    
cufflinks 20.77 0.0 79.7571    
cufflinks 2.13595 0.0 13.4629   Low
cufflinks 2.09814 0.0 13.1185   Low
cufflinks 0.619312 0.0 4.22833   Low
cufflinks 12.5126 0.0 53.5347    
cufflinks 13.4753 0.0 58.339    

0 Strain