Gene : Phvul.007G208600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR36027:SF1 - ASYNAPTIC 3 Genomic Order:  1943
Name:  ? Phvul.007G208600 Secondary Identifier:  ? PAC:37166163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G208600 0.5kb upstream 0.5kb upstream 7387 true Chr07: 33088653-33096039 Phaseolus vulgaris
Phvul.007G208600 0.5kb upstream 0.5kb upstream 500 false Chr07: 33095540-33096039 Phaseolus vulgaris
Phvul.007G208600 0.5kb downstream 0.5kb downstream 7387 true Chr07: 33088153-33095539 Phaseolus vulgaris
Phvul.007G208600 0.5kb downstream 0.5kb downstream 500 false Chr07: 33088153-33088652 Phaseolus vulgaris
Phvul.007G208600 1.0kb upstream 1.0kb upstream 7887 true Chr07: 33088653-33096539 Phaseolus vulgaris
Phvul.007G208600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33095540-33096539 Phaseolus vulgaris
Phvul.007G208600 1.0kb downstream 1.0kb downstream 7887 true Chr07: 33087653-33095539 Phaseolus vulgaris
Phvul.007G208600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33087653-33088652 Phaseolus vulgaris
Phvul.007G208600 2.0kb upstream 2.0kb upstream 8887 true Chr07: 33088653-33097539 Phaseolus vulgaris
Phvul.007G208600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33095540-33097539 Phaseolus vulgaris
Phvul.007G208600 2.0kb downstream 2.0kb downstream 8887 true Chr07: 33086653-33095539 Phaseolus vulgaris
Phvul.007G208600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33086653-33088652 Phaseolus vulgaris
Phvul.007G208600 5.0kb upstream 5.0kb upstream 11887 true Chr07: 33088653-33100539 Phaseolus vulgaris
Phvul.007G208600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33095540-33100539 Phaseolus vulgaris
Phvul.007G208600 5.0kb downstream 5.0kb downstream 11887 true Chr07: 33083653-33095539 Phaseolus vulgaris
Phvul.007G208600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33083653-33088652 Phaseolus vulgaris
Phvul.007G208600 10.0kb upstream 10.0kb upstream 16887 true Chr07: 33088653-33105539 Phaseolus vulgaris
Phvul.007G208600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33095540-33105539 Phaseolus vulgaris
Phvul.007G208600 10.0kb downstream 10.0kb downstream 16887 true Chr07: 33078653-33095539 Phaseolus vulgaris
Phvul.007G208600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33078653-33088652 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026354 5273 Angiosperm View MSA
122301554 5265 Fabidae View MSA
124064742 5270 Rosid View MSA
123736422 5271 Pentapetalae View MSA
122789139 5272 Eudicot View MSA
121296292 5274 Embryophyte View MSA
123334482 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.724535 0.0 2.43272    
cufflinks 0.664033 0.0 2.25117    
cufflinks 0.934853 0.0 3.04194    
cufflinks 0.597787 0.0 2.06502    
cufflinks 0.73274 0.0 2.49002    
cufflinks 1.90234 0.0 5.71025    
cufflinks 1.98375 0.0 5.89719    
cufflinks 5.15965 0.0 13.9216   High
cufflinks 1.33359 0.0 4.15685    
cufflinks 0.0815259 0.0 0.332918 Low Low
cufflinks 0.888066 0.0 2.9326    

0 Strain