Gene : Phvul.007G210800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10969:SF25 - AUTOPHAGY-RELATED PROTEIN 8I Genomic Order:  1965
Name:  ? Phvul.007G210800 Secondary Identifier:  ? PAC:37166138
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G210800 0.5kb upstream 0.5kb upstream 1751 true Chr07: 33281712-33283462 Phaseolus vulgaris
Phvul.007G210800 0.5kb upstream 0.5kb upstream 500 false Chr07: 33281712-33282211 Phaseolus vulgaris
Phvul.007G210800 0.5kb downstream 0.5kb downstream 1751 true Chr07: 33282212-33283962 Phaseolus vulgaris
Phvul.007G210800 0.5kb downstream 0.5kb downstream 500 false Chr07: 33283463-33283962 Phaseolus vulgaris
Phvul.007G210800 1.0kb upstream 1.0kb upstream 2251 true Chr07: 33281212-33283462 Phaseolus vulgaris
Phvul.007G210800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33281212-33282211 Phaseolus vulgaris
Phvul.007G210800 1.0kb downstream 1.0kb downstream 2251 true Chr07: 33282212-33284462 Phaseolus vulgaris
Phvul.007G210800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33283463-33284462 Phaseolus vulgaris
Phvul.007G210800 2.0kb upstream 2.0kb upstream 3251 true Chr07: 33280212-33283462 Phaseolus vulgaris
Phvul.007G210800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33280212-33282211 Phaseolus vulgaris
Phvul.007G210800 2.0kb downstream 2.0kb downstream 3251 true Chr07: 33282212-33285462 Phaseolus vulgaris
Phvul.007G210800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33283463-33285462 Phaseolus vulgaris
Phvul.007G210800 5.0kb upstream 5.0kb upstream 6251 true Chr07: 33277212-33283462 Phaseolus vulgaris
Phvul.007G210800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33277212-33282211 Phaseolus vulgaris
Phvul.007G210800 5.0kb downstream 5.0kb downstream 6251 true Chr07: 33282212-33288462 Phaseolus vulgaris
Phvul.007G210800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33283463-33288462 Phaseolus vulgaris
Phvul.007G210800 10.0kb upstream 10.0kb upstream 11251 true Chr07: 33272212-33283462 Phaseolus vulgaris
Phvul.007G210800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33272212-33282211 Phaseolus vulgaris
Phvul.007G210800 10.0kb downstream 10.0kb downstream 11251 true Chr07: 33282212-33293462 Phaseolus vulgaris
Phvul.007G210800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33283463-33293462 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314398 5265 Fabidae View MSA
124068997 5270 Rosid View MSA
123743187 5271 Pentapetalae View MSA
122792251 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 104.656 0.0 270.541 High High
cufflinks 30.8512 0.0 85.0756    
cufflinks 33.8471 0.0 92.3749    
cufflinks 30.062 0.0 83.06    
cufflinks 33.5774 0.0 91.6585 High  
cufflinks 14.1974 0.0 42.3371   Low
cufflinks 32.4622 0.0 89.0918 High  
cufflinks 20.7272 0.0 59.2362    
cufflinks 44.333 0.0 118.801 High  
cufflinks 37.2467 0.0 100.973 High  
cufflinks 21.2595 0.0 60.759    

0 Strain