Gene : Phvul.007G211000 P. vulgaris v2.1
Genomic Order:  1967 Name:  ? Phvul.007G211000
Secondary Identifier:  ? PAC:37165907
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G211000 0.5kb upstream 0.5kb upstream 4614 true Chr07: 33291741-33296354 Phaseolus vulgaris
Phvul.007G211000 0.5kb upstream 0.5kb upstream 500 false Chr07: 33291741-33292240 Phaseolus vulgaris
Phvul.007G211000 0.5kb downstream 0.5kb downstream 4614 true Chr07: 33292241-33296854 Phaseolus vulgaris
Phvul.007G211000 0.5kb downstream 0.5kb downstream 500 false Chr07: 33296355-33296854 Phaseolus vulgaris
Phvul.007G211000 1.0kb upstream 1.0kb upstream 5114 true Chr07: 33291241-33296354 Phaseolus vulgaris
Phvul.007G211000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33291241-33292240 Phaseolus vulgaris
Phvul.007G211000 1.0kb downstream 1.0kb downstream 5114 true Chr07: 33292241-33297354 Phaseolus vulgaris
Phvul.007G211000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33296355-33297354 Phaseolus vulgaris
Phvul.007G211000 2.0kb upstream 2.0kb upstream 6114 true Chr07: 33290241-33296354 Phaseolus vulgaris
Phvul.007G211000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33290241-33292240 Phaseolus vulgaris
Phvul.007G211000 2.0kb downstream 2.0kb downstream 6114 true Chr07: 33292241-33298354 Phaseolus vulgaris
Phvul.007G211000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33296355-33298354 Phaseolus vulgaris
Phvul.007G211000 5.0kb upstream 5.0kb upstream 9114 true Chr07: 33287241-33296354 Phaseolus vulgaris
Phvul.007G211000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33287241-33292240 Phaseolus vulgaris
Phvul.007G211000 5.0kb downstream 5.0kb downstream 9114 true Chr07: 33292241-33301354 Phaseolus vulgaris
Phvul.007G211000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33296355-33301354 Phaseolus vulgaris
Phvul.007G211000 10.0kb upstream 10.0kb upstream 14114 true Chr07: 33282241-33296354 Phaseolus vulgaris
Phvul.007G211000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33282241-33292240 Phaseolus vulgaris
Phvul.007G211000 10.0kb downstream 10.0kb downstream 14114 true Chr07: 33292241-33306354 Phaseolus vulgaris
Phvul.007G211000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33296355-33306354 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310053 5265 Fabidae View MSA
124069356 5270 Rosid View MSA
123742028 5271 Pentapetalae View MSA
122795561 5272 Eudicot View MSA
122048259 5273 Angiosperm View MSA
121350549 5274 Embryophyte View MSA
123427576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.734244 0.0 2.74671    
cufflinks 2.4984 0.0 8.28323   High
cufflinks 0.0575835 0.0 0.268955 Low Low
cufflinks 0.601244 0.0 2.3025    
cufflinks 0.924036 0.0 3.40385    
cufflinks 0.0434546 0.0 0.209517 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.37612 0.0 7.92454   High
cufflinks 0.693299 0.0 2.61589    

0 Strain