Gene : Phvul.007G211200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33824:SF3 - POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  1969
Name:  ? Phvul.007G211200 Secondary Identifier:  ? PAC:37166673
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G211200 0.5kb upstream 0.5kb upstream 2043 true Chr07: 33303499-33305541 Phaseolus vulgaris
Phvul.007G211200 0.5kb upstream 0.5kb upstream 500 false Chr07: 33303499-33303998 Phaseolus vulgaris
Phvul.007G211200 0.5kb downstream 0.5kb downstream 2043 true Chr07: 33303999-33306041 Phaseolus vulgaris
Phvul.007G211200 0.5kb downstream 0.5kb downstream 500 false Chr07: 33305542-33306041 Phaseolus vulgaris
Phvul.007G211200 1.0kb upstream 1.0kb upstream 2543 true Chr07: 33302999-33305541 Phaseolus vulgaris
Phvul.007G211200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33302999-33303998 Phaseolus vulgaris
Phvul.007G211200 1.0kb downstream 1.0kb downstream 2543 true Chr07: 33303999-33306541 Phaseolus vulgaris
Phvul.007G211200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33305542-33306541 Phaseolus vulgaris
Phvul.007G211200 2.0kb upstream 2.0kb upstream 3543 true Chr07: 33301999-33305541 Phaseolus vulgaris
Phvul.007G211200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33301999-33303998 Phaseolus vulgaris
Phvul.007G211200 2.0kb downstream 2.0kb downstream 3543 true Chr07: 33303999-33307541 Phaseolus vulgaris
Phvul.007G211200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33305542-33307541 Phaseolus vulgaris
Phvul.007G211200 5.0kb upstream 5.0kb upstream 6543 true Chr07: 33298999-33305541 Phaseolus vulgaris
Phvul.007G211200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33298999-33303998 Phaseolus vulgaris
Phvul.007G211200 5.0kb downstream 5.0kb downstream 6543 true Chr07: 33303999-33310541 Phaseolus vulgaris
Phvul.007G211200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33305542-33310541 Phaseolus vulgaris
Phvul.007G211200 10.0kb upstream 10.0kb upstream 11543 true Chr07: 33293999-33305541 Phaseolus vulgaris
Phvul.007G211200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33293999-33303998 Phaseolus vulgaris
Phvul.007G211200 10.0kb downstream 10.0kb downstream 11543 true Chr07: 33303999-33315541 Phaseolus vulgaris
Phvul.007G211200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33305542-33315541 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309497 5265 Fabidae View MSA
124063250 5270 Rosid View MSA
123741209 5271 Pentapetalae View MSA
122787118 5272 Eudicot View MSA
122046905 5273 Angiosperm View MSA
121345017 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.631 0.0 32.1316    
cufflinks 17.8702 0.0 50.7899    
cufflinks 62.3242 0.0 161.764 High High
cufflinks 20.5547 0.0 57.4733    
cufflinks 14.2918 0.0 41.4724    
cufflinks 12.7372 0.0 37.5837    
cufflinks 6.68336 0.0 21.1478   Low
cufflinks 9.27421 0.0 28.2814    
cufflinks 8.54836 0.0 26.3442    
cufflinks 12.3655 0.0 36.5737    
cufflinks 12.4181 0.0 36.6674    

0 Strain