Gene : Phvul.005G074700 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  726
Name:  ? Phvul.005G074700 Secondary Identifier:  ? PAC:37154350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G074700 0.5kb upstream 0.5kb upstream 1650 true Chr05: 13540520-13542169 Phaseolus vulgaris
Phvul.005G074700 0.5kb upstream 0.5kb upstream 500 false Chr05: 13540520-13541019 Phaseolus vulgaris
Phvul.005G074700 0.5kb downstream 0.5kb downstream 1650 true Chr05: 13541020-13542669 Phaseolus vulgaris
Phvul.005G074700 0.5kb downstream 0.5kb downstream 500 false Chr05: 13542170-13542669 Phaseolus vulgaris
Phvul.005G074700 1.0kb upstream 1.0kb upstream 2150 true Chr05: 13540020-13542169 Phaseolus vulgaris
Phvul.005G074700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13540020-13541019 Phaseolus vulgaris
Phvul.005G074700 1.0kb downstream 1.0kb downstream 2150 true Chr05: 13541020-13543169 Phaseolus vulgaris
Phvul.005G074700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13542170-13543169 Phaseolus vulgaris
Phvul.005G074700 2.0kb upstream 2.0kb upstream 3150 true Chr05: 13539020-13542169 Phaseolus vulgaris
Phvul.005G074700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13539020-13541019 Phaseolus vulgaris
Phvul.005G074700 2.0kb downstream 2.0kb downstream 3150 true Chr05: 13541020-13544169 Phaseolus vulgaris
Phvul.005G074700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13542170-13544169 Phaseolus vulgaris
Phvul.005G074700 5.0kb upstream 5.0kb upstream 6150 true Chr05: 13536020-13542169 Phaseolus vulgaris
Phvul.005G074700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13536020-13541019 Phaseolus vulgaris
Phvul.005G074700 5.0kb downstream 5.0kb downstream 6150 true Chr05: 13541020-13547169 Phaseolus vulgaris
Phvul.005G074700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13542170-13547169 Phaseolus vulgaris
Phvul.005G074700 10.0kb upstream 10.0kb upstream 11150 true Chr05: 13531020-13542169 Phaseolus vulgaris
Phvul.005G074700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13531020-13541019 Phaseolus vulgaris
Phvul.005G074700 10.0kb downstream 10.0kb downstream 11150 true Chr05: 13541020-13552169 Phaseolus vulgaris
Phvul.005G074700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13542170-13552169 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300094 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.1496 0.0 75.903    
cufflinks 50.5455 0.0 130.787 High  
cufflinks 5.5086 0.0 16.6424   Low
cufflinks 24.2565 0.0 63.1486    
cufflinks 35.6433 0.0 92.1594 High  
cufflinks 19.6522 0.0 52.3076    
cufflinks 86.4761 0.0 230.554 High  
cufflinks 42.6874 0.0 110.339 High  
cufflinks 22.7014 0.0 59.4611    
cufflinks 201.228 0.0 578.167 High High
cufflinks 42.8245 0.0 110.732 High  

0 Strain