Gene : Phvul.005G073000 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  822
Name:  ? Phvul.005G073000 Secondary Identifier:  ? PAC:37154339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G073000 0.5kb upstream 0.5kb upstream 1345 true Chr05: 21017685-21019029 Phaseolus vulgaris
Phvul.005G073000 0.5kb upstream 0.5kb upstream 500 false Chr05: 21018530-21019029 Phaseolus vulgaris
Phvul.005G073000 0.5kb downstream 0.5kb downstream 1345 true Chr05: 21017185-21018529 Phaseolus vulgaris
Phvul.005G073000 0.5kb downstream 0.5kb downstream 500 false Chr05: 21017185-21017684 Phaseolus vulgaris
Phvul.005G073000 1.0kb upstream 1.0kb upstream 1845 true Chr05: 21017685-21019529 Phaseolus vulgaris
Phvul.005G073000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21018530-21019529 Phaseolus vulgaris
Phvul.005G073000 1.0kb downstream 1.0kb downstream 1845 true Chr05: 21016685-21018529 Phaseolus vulgaris
Phvul.005G073000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21016685-21017684 Phaseolus vulgaris
Phvul.005G073000 2.0kb upstream 2.0kb upstream 2845 true Chr05: 21017685-21020529 Phaseolus vulgaris
Phvul.005G073000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21018530-21020529 Phaseolus vulgaris
Phvul.005G073000 2.0kb downstream 2.0kb downstream 2845 true Chr05: 21015685-21018529 Phaseolus vulgaris
Phvul.005G073000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21015685-21017684 Phaseolus vulgaris
Phvul.005G073000 5.0kb upstream 5.0kb upstream 5845 true Chr05: 21017685-21023529 Phaseolus vulgaris
Phvul.005G073000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21018530-21023529 Phaseolus vulgaris
Phvul.005G073000 5.0kb downstream 5.0kb downstream 5845 true Chr05: 21012685-21018529 Phaseolus vulgaris
Phvul.005G073000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21012685-21017684 Phaseolus vulgaris
Phvul.005G073000 10.0kb upstream 10.0kb upstream 10845 true Chr05: 21017685-21028529 Phaseolus vulgaris
Phvul.005G073000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21018530-21028529 Phaseolus vulgaris
Phvul.005G073000 10.0kb downstream 10.0kb downstream 10845 true Chr05: 21007685-21018529 Phaseolus vulgaris
Phvul.005G073000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21007685-21017684 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.4829 0.0 232.035 High  
cufflinks 34.3647 0.0 90.8853 High  
cufflinks 39.8988 0.0 104.355 High  
cufflinks 49.8154 0.0 128.982 High  
cufflinks 87.1681 0.0 226.033 High  
cufflinks 47.3289 0.0 123.048 High  
cufflinks 41.4418 0.0 107.985 High  
cufflinks 20.7284 0.0 56.8851   Low
cufflinks 42.9541 0.0 111.7 High  
cufflinks 111.604 0.0 290.984 High High
cufflinks 108.933 0.0 284.099 High High

0 Strain