Gene : Phvul.005G076500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10788:SF6 - BCDNA.GH08860 Genomic Order:  750
Name:  ? Phvul.005G076500 Secondary Identifier:  ? PAC:37154362
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G076500 0.5kb upstream 0.5kb upstream 24351 true Chr05: 16306085-16330435 Phaseolus vulgaris
Phvul.005G076500 0.5kb upstream 0.5kb upstream 500 false Chr05: 16306085-16306584 Phaseolus vulgaris
Phvul.005G076500 0.5kb downstream 0.5kb downstream 24351 true Chr05: 16306585-16330935 Phaseolus vulgaris
Phvul.005G076500 0.5kb downstream 0.5kb downstream 500 false Chr05: 16330436-16330935 Phaseolus vulgaris
Phvul.005G076500 1.0kb upstream 1.0kb upstream 24851 true Chr05: 16305585-16330435 Phaseolus vulgaris
Phvul.005G076500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 16305585-16306584 Phaseolus vulgaris
Phvul.005G076500 1.0kb downstream 1.0kb downstream 24851 true Chr05: 16306585-16331435 Phaseolus vulgaris
Phvul.005G076500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 16330436-16331435 Phaseolus vulgaris
Phvul.005G076500 2.0kb upstream 2.0kb upstream 25851 true Chr05: 16304585-16330435 Phaseolus vulgaris
Phvul.005G076500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 16304585-16306584 Phaseolus vulgaris
Phvul.005G076500 2.0kb downstream 2.0kb downstream 25851 true Chr05: 16306585-16332435 Phaseolus vulgaris
Phvul.005G076500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 16330436-16332435 Phaseolus vulgaris
Phvul.005G076500 5.0kb upstream 5.0kb upstream 28851 true Chr05: 16301585-16330435 Phaseolus vulgaris
Phvul.005G076500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 16301585-16306584 Phaseolus vulgaris
Phvul.005G076500 5.0kb downstream 5.0kb downstream 28851 true Chr05: 16306585-16335435 Phaseolus vulgaris
Phvul.005G076500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 16330436-16335435 Phaseolus vulgaris
Phvul.005G076500 10.0kb upstream 10.0kb upstream 33851 true Chr05: 16296585-16330435 Phaseolus vulgaris
Phvul.005G076500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 16296585-16306584 Phaseolus vulgaris
Phvul.005G076500 10.0kb downstream 10.0kb downstream 33851 true Chr05: 16306585-16340435 Phaseolus vulgaris
Phvul.005G076500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 16330436-16340435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314061 5265 Fabidae View MSA
124068150 5270 Rosid View MSA
123743549 5271 Pentapetalae View MSA
122786791 5272 Eudicot View MSA
122045463 5273 Angiosperm View MSA
121344657 5274 Embryophyte View MSA
123428106 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94632 0.0 8.78981   Low
cufflinks 2.91926 0.0 13.2298    
cufflinks 18.644 0.0 72.7771   High
cufflinks 4.22737 0.0 17.6601    
cufflinks 4.57585 0.0 17.2593    
cufflinks 10.2682 0.0 41.0425    
cufflinks 12.6999 0.0 45.1477   High
cufflinks 14.0978 0.0 54.5061   High
cufflinks 5.08113 0.0 20.3649    
cufflinks 1.98676 0.0 7.61343   Low
cufflinks 5.83272 0.0 23.1589    

0 Strain