Gene : Phvul.007G217000 P. vulgaris v2.1
Genomic Order:  2024 Name:  ? Phvul.007G217000
Secondary Identifier:  ? PAC:37166968
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G217000 0.5kb upstream 0.5kb upstream 1643 true Chr07: 33922303-33923945 Phaseolus vulgaris
Phvul.007G217000 0.5kb upstream 0.5kb upstream 500 false Chr07: 33922303-33922802 Phaseolus vulgaris
Phvul.007G217000 0.5kb downstream 0.5kb downstream 1643 true Chr07: 33922803-33924445 Phaseolus vulgaris
Phvul.007G217000 0.5kb downstream 0.5kb downstream 500 false Chr07: 33923946-33924445 Phaseolus vulgaris
Phvul.007G217000 1.0kb upstream 1.0kb upstream 2143 true Chr07: 33921803-33923945 Phaseolus vulgaris
Phvul.007G217000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33921803-33922802 Phaseolus vulgaris
Phvul.007G217000 1.0kb downstream 1.0kb downstream 2143 true Chr07: 33922803-33924945 Phaseolus vulgaris
Phvul.007G217000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33923946-33924945 Phaseolus vulgaris
Phvul.007G217000 2.0kb upstream 2.0kb upstream 3143 true Chr07: 33920803-33923945 Phaseolus vulgaris
Phvul.007G217000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33920803-33922802 Phaseolus vulgaris
Phvul.007G217000 2.0kb downstream 2.0kb downstream 3143 true Chr07: 33922803-33925945 Phaseolus vulgaris
Phvul.007G217000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33923946-33925945 Phaseolus vulgaris
Phvul.007G217000 5.0kb upstream 5.0kb upstream 6143 true Chr07: 33917803-33923945 Phaseolus vulgaris
Phvul.007G217000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33917803-33922802 Phaseolus vulgaris
Phvul.007G217000 5.0kb downstream 5.0kb downstream 6143 true Chr07: 33922803-33928945 Phaseolus vulgaris
Phvul.007G217000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33923946-33928945 Phaseolus vulgaris
Phvul.007G217000 10.0kb upstream 10.0kb upstream 11143 true Chr07: 33912803-33923945 Phaseolus vulgaris
Phvul.007G217000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33912803-33922802 Phaseolus vulgaris
Phvul.007G217000 10.0kb downstream 10.0kb downstream 11143 true Chr07: 33922803-33933945 Phaseolus vulgaris
Phvul.007G217000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33923946-33933945 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047454 5273 Angiosperm View MSA
122309176 5265 Fabidae View MSA
124064111 5270 Rosid View MSA
123751638 5271 Pentapetalae View MSA
122794331 5272 Eudicot View MSA
121310742 5274 Embryophyte View MSA
123348154 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8209 0.0 49.9784    
cufflinks 13.9639 0.0 37.9435    
cufflinks 6.1786 0.0 18.2272    
cufflinks 120.372 0.0 329.44 High High
cufflinks 12.1562 0.0 33.3236    
cufflinks 11.2013 0.0 31.0259    
cufflinks 9.93022 0.0 27.5645    
cufflinks 3.46733 0.0 10.8153   Low
cufflinks 30.6528 0.0 79.382 High  
cufflinks 9.27369 0.0 26.1049    
cufflinks 11.7035 0.0 32.1222    

0 Strain