Gene : Phvul.007G217600 P. vulgaris v2.1
Defline:  (1 of 2) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  2030
Name:  ? Phvul.007G217600 Secondary Identifier:  ? PAC:37166271
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5690 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G217600 0.5kb upstream 0.5kb upstream 6117 true Chr07: 34031590-34037706 Phaseolus vulgaris
Phvul.007G217600 0.5kb upstream 0.5kb upstream 500 false Chr07: 34031590-34032089 Phaseolus vulgaris
Phvul.007G217600 0.5kb downstream 0.5kb downstream 6117 true Chr07: 34032090-34038206 Phaseolus vulgaris
Phvul.007G217600 0.5kb downstream 0.5kb downstream 500 false Chr07: 34037707-34038206 Phaseolus vulgaris
Phvul.007G217600 1.0kb upstream 1.0kb upstream 6617 true Chr07: 34031090-34037706 Phaseolus vulgaris
Phvul.007G217600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34031090-34032089 Phaseolus vulgaris
Phvul.007G217600 1.0kb downstream 1.0kb downstream 6617 true Chr07: 34032090-34038706 Phaseolus vulgaris
Phvul.007G217600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34037707-34038706 Phaseolus vulgaris
Phvul.007G217600 2.0kb upstream 2.0kb upstream 7617 true Chr07: 34030090-34037706 Phaseolus vulgaris
Phvul.007G217600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34030090-34032089 Phaseolus vulgaris
Phvul.007G217600 2.0kb downstream 2.0kb downstream 7617 true Chr07: 34032090-34039706 Phaseolus vulgaris
Phvul.007G217600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34037707-34039706 Phaseolus vulgaris
Phvul.007G217600 5.0kb upstream 5.0kb upstream 10617 true Chr07: 34027090-34037706 Phaseolus vulgaris
Phvul.007G217600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34027090-34032089 Phaseolus vulgaris
Phvul.007G217600 5.0kb downstream 5.0kb downstream 10617 true Chr07: 34032090-34042706 Phaseolus vulgaris
Phvul.007G217600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34037707-34042706 Phaseolus vulgaris
Phvul.007G217600 10.0kb upstream 10.0kb upstream 15617 true Chr07: 34022090-34037706 Phaseolus vulgaris
Phvul.007G217600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34022090-34032089 Phaseolus vulgaris
Phvul.007G217600 10.0kb downstream 10.0kb downstream 15617 true Chr07: 34032090-34047706 Phaseolus vulgaris
Phvul.007G217600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34037707-34047706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307847 5265 Fabidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.58 0.0 63.6524    
cufflinks 24.0047 0.0 62.1202    
cufflinks 19.6135 0.0 50.6999    
cufflinks 54.8343 0.0 148.109 High High
cufflinks 25.5675 0.0 66.1941    
cufflinks 18.0144 0.0 46.5906   Low
cufflinks 24.8785 0.0 64.4689    
cufflinks 25.1775 0.0 65.2859    
cufflinks 40.0158 0.0 105.769 High High
cufflinks 16.9229 0.0 43.8282   Low
cufflinks 23.8528 0.0 61.697    

0 Strain