Gene : Phvul.007G200400 P. vulgaris v2.1
Defline:  (1 of 14) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  1862
Name:  ? Phvul.007G200400 Secondary Identifier:  ? PAC:37167390
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G200400 0.5kb upstream 0.5kb upstream 2149 true Chr07: 32345442-32347590 Phaseolus vulgaris
Phvul.007G200400 0.5kb upstream 0.5kb upstream 500 false Chr07: 32345442-32345941 Phaseolus vulgaris
Phvul.007G200400 0.5kb downstream 0.5kb downstream 2149 true Chr07: 32345942-32348090 Phaseolus vulgaris
Phvul.007G200400 0.5kb downstream 0.5kb downstream 500 false Chr07: 32347591-32348090 Phaseolus vulgaris
Phvul.007G200400 1.0kb upstream 1.0kb upstream 2649 true Chr07: 32344942-32347590 Phaseolus vulgaris
Phvul.007G200400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32344942-32345941 Phaseolus vulgaris
Phvul.007G200400 1.0kb downstream 1.0kb downstream 2649 true Chr07: 32345942-32348590 Phaseolus vulgaris
Phvul.007G200400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32347591-32348590 Phaseolus vulgaris
Phvul.007G200400 2.0kb upstream 2.0kb upstream 3649 true Chr07: 32343942-32347590 Phaseolus vulgaris
Phvul.007G200400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32343942-32345941 Phaseolus vulgaris
Phvul.007G200400 2.0kb downstream 2.0kb downstream 3649 true Chr07: 32345942-32349590 Phaseolus vulgaris
Phvul.007G200400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32347591-32349590 Phaseolus vulgaris
Phvul.007G200400 5.0kb upstream 5.0kb upstream 6649 true Chr07: 32340942-32347590 Phaseolus vulgaris
Phvul.007G200400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32340942-32345941 Phaseolus vulgaris
Phvul.007G200400 5.0kb downstream 5.0kb downstream 6649 true Chr07: 32345942-32352590 Phaseolus vulgaris
Phvul.007G200400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32347591-32352590 Phaseolus vulgaris
Phvul.007G200400 10.0kb upstream 10.0kb upstream 11649 true Chr07: 32335942-32347590 Phaseolus vulgaris
Phvul.007G200400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32335942-32345941 Phaseolus vulgaris
Phvul.007G200400 10.0kb downstream 10.0kb downstream 11649 true Chr07: 32345942-32357590 Phaseolus vulgaris
Phvul.007G200400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32347591-32357590 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301886 5265 Fabidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.81338 0.0 13.8336   Low
cufflinks 16.5222 0.0 43.0697    
cufflinks 7.43628 0.0 20.5684    
cufflinks 17.0752 0.0 44.3896    
cufflinks 46.9087 0.0 123.509 High High
cufflinks 14.3337 0.0 37.6143    
cufflinks 7.64643 0.0 20.8791    
cufflinks 4.31864 0.0 12.5329   Low
cufflinks 13.3839 0.0 35.1236    
cufflinks 37.8545 0.0 98.5368 High High
cufflinks 39.604 0.0 103.444 High High

0 Strain